Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictalurus_20punctatus_20[refseq_20GCF_5F001660625.1_202016-06-21] 9,341 sequences; 783,274,721 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq28 89.7 5e-13 >seq28 Length=18419168 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 26762 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGA 26821 |||||||||||| | ||||| ||||| | ||||| || | |||||| | || | || Sbjct 12498067 AAACAAAATGCAGATCTTTGTGAAAACCCTGACTGGCAAGACCATCACCCTTGAGGTTGA 12498008 Query 26822 ATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCC 26881 | | |||||||| ||| | ||||| || || ||||||||||| || || || Sbjct 12498007 GCCCAGTGACACCATTGAGAATGTCAAGGCTAAAATCCAGGACAAAGAAGGCATTCCCCC 12497948 Query 26882 CGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGA 26941 || || || || || || | | |||||| || || ||||||| | | | | ||| Sbjct 12497947 AGACCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGA 12497888 Query 26942 CTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||| || || || || || || || |||| ||||| ||| | || || || || Sbjct 12497887 CTACAATATCCAGAAGGAGTCCACCCTCCACCTGGTGCTGCGTCTGAGGGGCGG 12497834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478606510181520