Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictalurus_20punctatus_20[refseq_20GCF_5F001660625.1_202016-06-21] 9,341 sequences; 783,274,721 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq7 96.9 3e-15 >seq7 Length=31027439 Score = 96.9 bits (106), Expect = 3e-15 Identities = 119/163 (73%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || || | ||| || | ||| || || | |||| ||||||||||||||| || || Sbjct 6112747 AGCCCTGTGATATGGGCGATCATGTATGTGAGTAGGGCATAGCTGGCAATGTTGAAGGGG 6112688 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 || |||| || |||||||| || | ||| || | |||||| || |||||||| || | Sbjct 6112687 ACACCCAGGCCGATGTCTCCTGAACGCTGGTATAACTGACATGACAGCTCACCATCTGAG 6112628 Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCA 20399 || || || || || || |||||||| || || ||||||| Sbjct 6112627 ACGTAGAACTGGCACAAAGCATGACAGGGTGGCAGAGCCATCA 6112585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441321264208440