Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictalurus_20punctatus_20[refseq_20GCF_5F001660625.1_202016-06-21] 9,341 sequences; 783,274,721 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq18 102 1e-16 >seq18 Length=24512808 Score = 102 bits (112), Expect = 1e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255 |||||| ||||| |||||||| | || ||| | | ||| ||||| | || |||| | Sbjct 14425537 CTGAAACTCTCCAGACAGCACGCGGCGTGTGTAGATGTTACTGGTGTAGGGCTCGATGGA 14425596 Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315 ||| || ||||| | |||||| || ||| ||| |||||||||||||||| |||||| Sbjct 14425597 CTCATTATTGCCCAGAATCTGTGCTGTGGAGGCAGTGGGCATGGGAGCCAAGAGCAGACT 14425656 Query 204316 GTTGCGCACACCGT 204329 |||||| ||||||| Sbjct 14425657 GTTGCGTACACCGT 14425670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795062355690960