Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictalurus_20punctatus_20[refseq_20GCF_5F001660625.1_202016-06-21] 9,341 sequences; 783,274,721 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq22 82.4 9e-11 >seq22 Length=19874160 Score = 82.4 bits (90), Expect = 9e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||| ||||| | || || |||||||||||||| |||||||| || || ||||| Sbjct 10485421 ACTCCAATTGGACCCATACCGGGGCCTCCACCTCCATGAGGAATACAAAAGGTTTTATGA 10485480 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGG 138280 | ||| || ||| | ||||||| ||||| |||| ||| Sbjct 10485481 AGATTCAGGTGAGAAACATCTGAGCCATAATCACCTGG 10485518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578930794699320