Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictalurus_20punctatus_20[refseq_20GCF_5F001660625.1_202016-06-21] 9,341 sequences; 783,274,721 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq25 102 1e-16 >seq25 Length=19457651 Score = 102 bits (112), Expect = 1e-16 Identities = 105/135 (78%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 65076 CGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-G 65134 |||||| | | || ||||| ||||||||| ||||||||||| ||||| || ||| | Sbjct 18109888 CGAGCGAGTGGTGGCTTTTGCTGCTGTGGAGGGAATCTTCTTCTCTGGGTC-TTTTGCTG 18109946 Query 65135 CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTA 65194 | |||| ||| |||||||| |||| || ||||||||||| |||||| |||||||| | Sbjct 18109947 CAATTTTCTGGCTGAAGAAGAGGGGCCTTATGCCAGGCCTCACCTTCTCCAATGAACTCA 18110006 Query 65195 TTTCCCGAGATGAGG 65209 | | ||||||||| Sbjct 18110007 TCAGCAGAGATGAGG 18110021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596499943042080