Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictalurus_20punctatus_20[refseq_20GCF_5F001660625.1_202016-06-21] 9,341 sequences; 783,274,721 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq28 84.2 4e-11 >seq28 Length=18419168 Score = 84.2 bits (92), Expect = 4e-11 Identities = 160/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| || || ||||| | || | || | || | ||| || |||||| || || Sbjct 12497831 ATACCGCCCCTCAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCG 12497890 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||| || || || |||||||| | ||||| || || || Sbjct 12497891 GACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGG 12497950 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| || || |||||| || ||||| || | || | || Sbjct 12497951 GGAATGCCTTCTTTGTCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTGGGCTCA 12498010 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTATT 192542 || || || || ||||| || ||||| | ||||| | ||| ||||||||||| || Sbjct 12498011 ACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCATTTTGTT 12498066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984362175895350