Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictalurus_20punctatus_20[refseq_20GCF_5F001660625.1_202016-06-21] 9,341 sequences; 783,274,721 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq25 109 7e-19 seq18 84.2 3e-11 >seq25 Length=19457651 Score = 109 bits (120), Expect = 7e-19 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094 |||| || | | |||||||||||| |||||| || |||||||| || |||| ||||| Sbjct 18110021 CCTCATCTCTGCTGATGAGTTCATTGGAGAAGGTGAGGCCTGGCATAAGGCCCCTCTTCT 18109962 Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 130144 ||| ||||||||| ||| ||| || |||||||||||||| ||||||||| Sbjct 18109961 TCAGCCAGAAAATTGCAGCAAAAGACCCAGAGAAGAAGATTCCCTCCACA 18109912 >seq18 Length=24512808 Score = 84.2 bits (92), Expect = 3e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| || | ||||| ||||| | | ||||||| || |||| || || ||||||||| Sbjct 14425568 TAGATGTTACTGGTGTAGGGCTCGATGGACTCATTATTGCCCAGAATCTGTGCTGTGGAG 14425627 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACC 118282 || ||||||||||| |||| ||| || ||||| || | ||| Sbjct 14425628 GCAGTGGGCATGGGAGCCAAGAGCAGACTGTTGCGTACACC 14425668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618362989959960