Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ictalurus_20punctatus_20[refseq_20GCF_5F001660625.1_202016-06-21] 9,341 sequences; 783,274,721 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq7 100 2e-16 >seq7 Length=31027439 Score = 100 bits (110), Expect = 2e-16 Identities = 120/161 (75%), Gaps = 4/161 (2%) Strand=Plus/Minus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || ||||| || || ||||||||||||||||| || || |||||||| || || ||| Sbjct 6112744 CCTGTGATATGGGCGATCATGTATGTGAGTAGGGCATAGCTGGCAATGTTGAAGGGGACA 6112685 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897 || ||||| || ||||| || | || |||| ||||||||| || | | | ||| || Sbjct 6112684 CCCAGGCCGATGTCTCCTGAACGCTGGTATAACTGACATGACAGCTCACCATCTGAGACG 6112625 Query 111898 TAAAATTG--ACAAAGTACATGACAAGGAGGCAATGCCATC 111936 || || || |||||| ||||||| || |||| |||||| Sbjct 6112624 TAGAACTGGCACAAAG--CATGACAGGGTGGCAGAGCCATC 6112586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391900979565583