Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kryptolebias_20marmoratus_20[refseq_20GCF_5F001649575.1_202016-05- 22] 3,073 sequences; 680,366,784 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq8 161 1e-34 >seq8 Length=7211506 Score = 161 bits (178), Expect = 1e-34 Identities = 142/177 (80%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || ||| || |||| ||| |||| ||||||||| || || | ||||||||| |||||||| Sbjct 4602863 CTTGAGTCCTGTGATGTGTGCGATCATGTAGGTGAGAAGAGCGTAGCTGGCGATGTTGAA 4602804 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 ||||||||||| ||||| || ||||||||||||||||||| || || ||||| ||| | Sbjct 4602803 AGGCACCCCCAGACCCATATCAGCCGAGCGCTGGTACAGCTGACACGACAGCTCACCGTC 4602744 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTC 145922 ||||||||||| || || ||||||||| ||||| |||||| ||| ||||| Sbjct 4602743 ACAGACGTAGAACTGACAGAGAGCGTGGCAGGGGGGCAGAGCCATGAGGGGGAGGTC 4602687 Score = 113 bits (124), Expect = 5e-20 Identities = 123/161 (76%), Gaps = 2/161 (1%) Strand=Plus/Minus Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| | || || ||||| ||||||||||||||||| |||||||| |||||||| ||| Sbjct 4601876 GTACTCTGCACCAAAGTGTCTCCACTGGAACCCGTAAACGGGCCCGAGGTCCCCCTCCTC 4601817 Query 146100 CCTGT-GCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCT 146158 | || | ||||| | | | |||||| | ||||||||||||||||||||||||| Sbjct 4601816 TCGGTCGGTGAAGCCCAGGTTGTCC-AGGAAGGCTCGGGACCCGTTGGCGTCCCAGATCT 4601758 Query 146159 TGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCC 146199 | ||||| || | || ||||| |||| | || |||||| Sbjct 4601757 TCACGCCTTTCTCCGACAGCTCCTTGGCATTTGTCGACCCC 4601717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590054133674920