Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kryptolebias_20marmoratus_20[refseq_20GCF_5F001649575.1_202016-05- 22] 3,073 sequences; 680,366,784 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq8 127 2e-24 >seq8 Length=7211506 Score = 127 bits (140), Expect = 2e-24 Identities = 132/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 || || |||| ||| ||||||| || || || || ||||||||||||||||| || || Sbjct 4602859 AGTCCTGTGATGTGTGCGATCATGTAGGTGAGAAGAGCGTAGCTGGCGATGTTGAAAGGC 4602800 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 ||||| || ||||| || || || | |||||||||||| || |||||||| || | Sbjct 4602799 ACCCCCAGACCCATATCAGCCGAGCGCTGGTACAGCTGACACGACAGCTCACCGTCACAG 4602740 Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTC 21163 ||||| |||||||| | | |||| || || || |||||||| | | |||||| Sbjct 4602739 ACGTAGAACTGACAGAGAGCGTGGCAGGGGGGCAGAGCCATGAGGGGGAGGTC 4602687 Score = 98.7 bits (108), Expect = 8e-16 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 21280 TGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGC 21339 ||||||| || ||||| |||||||||||||||||||| || ||||| || || ||||| Sbjct 4601877 TGTACTCTGCACCAAAGTGTCTCCACTGGAACCCGTAAACGGGCCCGAGGTCCCCCTCCT 4601818 Query 21340 GGCGGTCCCCGAAGCCCTGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTT 21399 ||||| ||||||| | ||| ||||| |||||||||| |||||||| || | Sbjct 4601817 CTCGGTCGGTGAAGCCCAGGTTGTCCAGGAAGGCTCGGGACCCGTTGGCGTCCCAGATCT 4601758 Query 21400 TTACGCC 21406 | ||||| Sbjct 4601757 TCACGCC 4601751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427759978853040