Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kryptolebias_20marmoratus_20[refseq_20GCF_5F001649575.1_202016-05- 22] 3,073 sequences; 680,366,784 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq38 136 3e-27 >seq38 Length=3763630 Score = 136 bits (150), Expect = 3e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 91815 CCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAACTGGAACAAAGTGGCT 91874 ||| ||| ||||||| | ||||||||| || || | || | || || | ||||||| Sbjct 3646169 CCTCCAAGGAGGACTGCGACATCATCACCGAGACCGCCACCAAGCTCGAGCGCAGTGGCT 3646228 Query 91875 TCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCTGCGCAACTCGGCACTGG 91934 |||||||||| || |||| || ||||| || || || |||||| || | | |||| Sbjct 3646229 TCTACTGGGGGCCCCTGGGCGTGGAGGACGCCCACCGCATGCTGAAGGACGCCCCGCTGG 3646288 Query 91935 GCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTTCACGCTGTCGTATCACT 91994 ||||||| ||||| || || ||| |||| ||||||||||| ||||||||||| || ||| Sbjct 3646289 GCAGCTTCCTCATCCGCGACAGCCGGCAGAAGGACGTCTTCTTCACGCTGTCCTACCACG 3646348 Query 91995 CTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAG 92032 | ||| || ||||| ||| | || || |||||| Sbjct 3646349 CCAAAGGCGGGCCGGTCAGCGTGCGCATCGACTACAAG 3646386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356220258272419