Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kryptolebias_20marmoratus_20[refseq_20GCF_5F001649575.1_202016-05- 22] 3,073 sequences; 680,366,784 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq8 123 2e-23 >seq8 Length=7211506 Score = 123 bits (136), Expect = 2e-23 Identities = 128/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 |||||| |||||||||| || || | ||||||||||||||||| || || || ||||| Sbjct 4601885 CATGTCTTTGTACTCTGCACCAAAGTGTCTCCACTGGAACCCGTAAACGGGCCCGAGGTC 4601826 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 || || || | || |||||| || |||| ||| ||| ||| || |||||||| Sbjct 4601825 CCCCTCCTCTCGGTCGGTGAAGCCCAGGTTGTCCAGGAAGGCTCGGGACCCGTTGGCGTC 4601766 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 ||||||||| || || ||||| || ||||| |||| ||||| ||||| Sbjct 4601765 CCAGATCTTCACGCCTTTCTCCGACAGCTCCTTGGCATTTGTCGACCC 4601718 Score = 111 bits (122), Expect = 1e-19 Identities = 116/151 (77%), Gaps = 1/151 (1%) Strand=Plus/Minus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || |||||||| ||||| ||| ||||||||||||||| || || ||||| | ||||| Sbjct 4602844 GCGATCATGTAGGTGAGAAGAGCGTAGCTGGCGATGTTGAAAGGCACCCCCAGACCCATA 4602785 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 || || || | |||||| ||||||||||| ||||| |||| | ||||| |||||||| Sbjct 4602784 TCAGCC-GAGCGCTGGTACAGCTGACACGACAGCTCACCGTCACAGACGTAGAACTGACA 4602726 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAGG 25656 | | || ||| || || ||||| || ||| Sbjct 4602725 GAGAGCGTGGCAGGGGGGCAGAGCCATGAGG 4602695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340124861102829