Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kryptolebias_20marmoratus_20[refseq_20GCF_5F001649575.1_202016-05- 22] 3,073 sequences; 680,366,784 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq23 100 3e-16 >seq23 Length=4589928 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | ||||| ||||| | ||||| || | |||||| | || | ||| || Sbjct 3279123 AACATGCAGATCTTTGTCAAAACCCTCACTGGGAAGACCATCACCCTTGAGGTGGAACCA 3279182 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 | |||||||||||| | || || ||||| ||||| || || || || || || Sbjct 3279183 AGTGACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGAC 3279242 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || || || || | | |||||| || || ||||||| | | | | |||||| Sbjct 3279243 CAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTAT 3279302 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| || |||||||| || ||||||| |||||| | || || || || Sbjct 3279303 AACATCCAGAAAGAATCCACCCTCCATCTTGTCCTGCGTCTCAGGGGTGG 3279352 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || | ||||| || | |||||| | || | || | | Sbjct 3279354 ATGCAGATCTTTGTCAAGACCCTCACTGGGAAGACCATCACCCTTGAGGTGGAGCCCAGT 3279413 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | || || ||||| ||||| ||||| || || || || || Sbjct 3279414 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCAG 3279473 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || || | | |||||| || || ||||||| | | | | |||||| ||| Sbjct 3279474 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 3279533 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || |||||||| || |||| ||||||||| | || || || || Sbjct 3279534 ATCCAGAAAGAATCCACCCTCCACCTGGTCCTGCGTCTGAGGGGGGG 3279580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478644013380560