Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kryptolebias_20marmoratus_20[refseq_20GCF_5F001649575.1_202016-05- 22] 3,073 sequences; 680,366,784 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq23 118 9e-22 >seq23 Length=4589928 Score = 118 bits (130), Expect = 9e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || || ||||||| | || |||||| | | Sbjct 3279354 ATGCAGATCTTTGTCAAGACCCTCACTGGGAAGACCATCACCCTTGAGGTGGAGCCCAGT 3279413 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| ||||| || ||| ||||| ||||| || || |||||||| Sbjct 3279414 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCAG 3279473 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||||||||| || | ||||||| ||||| || ||| ||||| Sbjct 3279474 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 3279533 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || ||||||||||| || || Sbjct 3279534 ATCCAGAAAGAATCCACCCTCCA 3279556 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || | || || || ||||||| | || ||||| | | Sbjct 3279126 ATGCAGATCTTTGTCAAAACCCTCACTGGGAAGACCATCACCCTTGAGGTGGAACCAAGT 3279185 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| ||||| || ||| ||||| || || || || |||||||| Sbjct 3279186 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 3279245 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||||||||| || | ||||||| ||||| || || || || Sbjct 3279246 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTATAAC 3279305 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || ||||||||||| || ||| | || || Sbjct 3279306 ATCCAGAAAGAATCCACCCTCCATCTTGTCCT 3279337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433311770918495