Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kryptolebias_20marmoratus_20[refseq_20GCF_5F001649575.1_202016-05- 22] 3,073 sequences; 680,366,784 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 6e-13 >seq3 Length=10095097 Score = 89.7 bits (98), Expect = 6e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 18657 CATTACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTC 18716 ||| ||||| | | | ||||| || ||||||||||| ||||||||||| ||||||||||| Sbjct 6544724 CATGACTCCAAATCTCTGATACTCAGCAACTCTTTTCTCAAAGAAATTTGTTTTTCCCTC 6544665 Query 18717 TAATGATATACATTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAA 18773 | || || | ||||| || ||||| ||||||| |||| || | ||||| || Sbjct 6544664 CAGAGAAATGGACTCCATGAAGTCAAAAGGATTTTCCGCATTGTAAACCTTTTTTAA 6544608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562087207995720