Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kryptolebias_20marmoratus_20[refseq_20GCF_5F001649575.1_202016-05- 22] 3,073 sequences; 680,366,784 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq10 134 1e-26 >seq10 Length=6656597 Score = 134 bits (148), Expect = 1e-26 Identities = 133/172 (77%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374 || ||||| || ||||||||||| || | ||||| |||||| || | |||||| ||||| Sbjct 6268203 AGGTCAGTTTCAGGGTTGTCACACTCGGTACACAGCACAAATTTTCTGATGAATCCATCC 6268144 Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434 |||| |||||| | ||| | |||||||| |||||||||||| | || ||||||||| Sbjct 6268143 AGCATGTCCTGCAGCTTGTTCGCCTCGTGGGATCCGTTGACGATGTAACGATCGTTTTTG 6268084 Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486 ||| | ||| || || ||||| || || || ||||| |||| ||||||| Sbjct 6268083 GTATCAAACTGGGTCTGAGCGCCGAGTTCACAACCGAAAAACTTGGTCGGGT 6268032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412826138178989