Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kryptolebias_20marmoratus_20[refseq_20GCF_5F001649575.1_202016-05- 22] 3,073 sequences; 680,366,784 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq408 100 2e-16 >seq408 Length=262724 Score = 100 bits (110), Expect = 2e-16 Identities = 79/95 (83%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 77433 CACCATTGATGGTGAACATGCTGTCTGTGTAGACGACCAGCTTCTTGATTTTGTTCTCCT 77492 |||| ||||||||||||||||||||||||||||| ||||| |||| ||| |||||||| | Sbjct 66792 CACCGTTGATGGTGAACATGCTGTCTGTGTAGACAACCAGTTTCTGGATGTTGTTCTCTT 66733 Query 77493 GAGCTTGTTGCAGTGCTTTGGATGCAGCCTGGATT 77527 || |||| ||| ||| || | || |||||| || Sbjct 66732 TGGCCTGTTCCAGAGCTCTGCAGGCTGCCTGGTTT 66698 Score = 87.8 bits (96), Expect = 1e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 77311 CCAGACAACCTCCAGCTCCAAATTGAGTTGGTCCAGCTTCATAAAGTCATCCTTGTTGAC 77370 |||||| || |||||| | || ||| ||||||| || |||||| || ||||||| Sbjct 66996 CCAGACCACACTCAGCTCTGAGTTCAGTCCATCCAGCTGCACAAAGTCGTCTTTGTTGAT 66937 Query 77371 AACTGACCCTCCGCCATGCAGCCTCCAGCCGTTCTGCTTCCAGTTCTTAACCCACTTAGT 77430 || | ||||| | |||||||||||||||| ||||||||||||| ||||| | || Sbjct 66936 GACGGGACCTCCAGACTTCAGCCTCCAGCCGTTCAGCTTCCAGTTCTTCACCCAGCTGGT 66877 Query 77431 CACACC 77436 ||| || Sbjct 66876 CACTCC 66871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397441114403365