Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kryptolebias_20marmoratus_20[refseq_20GCF_5F001649575.1_202016-05- 22] 3,073 sequences; 680,366,784 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq80 105 6e-18 >seq80 Length=2229659 Score = 105 bits (116), Expect = 6e-18 Identities = 265/399 (66%), Gaps = 9/399 (2%) Strand=Plus/Plus Query 131602 GGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAA 131661 |||||| ||| ||||||||| || ||||| | ||| || ||||||||||| || Sbjct 1868610 GGGACACTCGTCGGGACACATCAGAGACCAGTCTTGGTTGCTCTCCACTCGCTTCATGAA 1868669 Query 131662 CAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCAT 131721 || || || | ||| | ||||| || || || || ||| | | ||| ||| | ||| | Sbjct 1868670 CAGGTCGGGGATCCACAGGGCGTAGAAGAGGTCCCTGGCTCTCTGCTCCTCTTTTCCCGT 1868729 Query 131722 AAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGC 131781 | || |||| | | || || || | ||| ||||| || |||| |||| || Sbjct 1868730 GTTCTTCTTCAGCTCCAGGAATTCAAACACGTCGAAGTGCCACGGCTCCAGGTACATCGC 1868789 Query 131782 CATTGC-----GCCTTTGCGCTTACCGCCTTGATTAACATGACGAACCATGTTGTTGTAT 131836 | || |||||| || ||||| || | ||| | ||| | |||||||||| Sbjct 1868790 GAAGGCTCCGGGCCTTT--TGTTGCCGCCCTGGTCAACGTAGCGAGCAGTGTTGTTGTAA 1868847 Query 131837 ACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCA 131896 || | || |||||| |||| ||||| | ||| || ||||||| |||||||| || Sbjct 1868848 ACTCTCAGCATGGGGACCAACCCGTTCGAGTTCCCGTTGGTGCCGGCGATGTAGCTCCCG 1868907 Query 131897 TTGGCTCTGATTTTG-TGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGC 131955 | |||||||| | ||| || || || || || || || |||| || || || || Sbjct 1868908 GTTGCTCTGATGCAGCTGACCG-CGACGCCGATGCCGCCAGCGGATTTGGAAATGAGGGC 1868966 Query 131956 GCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTC 131994 ||| | | || |||| || || || || | |||||| Sbjct 1868967 GCACTGCTTCAGGGTGTCGTAAATGCCCTCGATGCTGTC 1869005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424918485277176