Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kryptolebias_20marmoratus_20[refseq_20GCF_5F001649575.1_202016-05- 22] 3,073 sequences; 680,366,784 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq80 89.7 2e-12 >seq80 Length=2229659 Score = 89.7 bits (98), Expect = 2e-12 Identities = 188/279 (67%), Gaps = 6/279 (2%) Strand=Plus/Minus Query 254998 CAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGCCCAGGAGCGTTCACCAT 255057 ||||||| ||||||||||| || || || ||| |||| | || ||||| ||| | || Sbjct 1868844 CAACAACACTGCTCGCTACGTTGACCAGGGCGGCAACAAAAGGCCCGGAGCCTTCGCGAT 1868785 Query 255058 CTACCTGGAGCCGTGGCACGCCGAC---ATTGAACGGTTTTTACTGCTGTCCGACAAGAC 255114 |||||||||||||||||| |||| ||||| || | |||| | || || Sbjct 1868784 GTACCTGGAGCCGTGGCACTTCGACGTGTTTGAA---TTCCTGGAGCTGAAGAAGAACAC 1868728 Query 255115 CGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCTGGTGCTGCGATCTGTT 255174 || | ||||||| || ||| | ||| ||| | ||| | ||| | ||| ||||| Sbjct 1868727 GGGAAAAGAGGAGCAGAGAGCCAGGGACCTCTTCTACGCCCTGTGGATCCCCGACCTGTT 1868668 Query 255175 TATGCGACGCGTGGAACGAGACGAGACCTGGAGCCTCATGTGTCCCAACTTATCGCCCGG 255234 ||| || ||||| | || | |||| || ||||||||| || | ||||| Sbjct 1868667 CATGAAGCGAGTGGAGAGCAACCAAGACTGGTCTCTGATGTGTCCCGACGAGTGTCCCGG 1868608 Query 255235 TCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTA 255273 || | ||| | ||||| || |||||||| || || || Sbjct 1868607 GCTCGACGAGTGCTGGGGGGAGGAGTTTGAGAAGCTTTA 1868569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588273462744485