Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kryptolebias_20marmoratus_20[refseq_20GCF_5F001649575.1_202016-05- 22] 3,073 sequences; 680,366,784 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq42 295 2e-74 seq460 176 1e-38 seq93 138 3e-27 seq23 113 1e-19 seq10 100 9e-16 seq26 84.2 7e-11 >seq42 Length=3555476 Score = 295 bits (326), Expect = 2e-74 Identities = 957/1474 (65%), Gaps = 19/1474 (1%) Strand=Plus/Plus Query 349200 CTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTG 349259 |||| || || ||| | || || || || |||||||||| ||||| || | | | Sbjct 3352340 CTATCGGCATTGATCTGGGCACCACCTACTCTTGTGTTGGTGTTTTCCAGCACGGAAAAG 3352399 Query 349260 TAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCG 349319 ||||||| || || || |||||||| ||||| || || || ||||| || ||||| | Sbjct 3352400 TAGAAATCATCGCTAACGATCAAGGCAACAGGACGACTCCCAGCTACGTGGCCTTTACAG 3352459 Query 349320 AAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATA 349379 | || || | | ||||| ||| |||| ||||| |||| ||| || || | || | Sbjct 3352460 ACACAGAAAGGCTCATTGGAGATGCTGCCAAAAACCAAGTTGCCATGAACCCCACCAACA 3352519 Query 349380 CGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTG 349439 || | ||||| || ||||| || ||||| |||| ||| ||| || || | Sbjct 3352520 CGATCTTTGACGCCAAGCGGCTCATTGGGAGAAAGTTTGACGACGCGGTGGTCCAGTCCG 3352579 Query 349440 ATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGG 349499 | | |||| | ||||| | || | ||| ||| || || || | | ||| Sbjct 3352580 ACATCAAACTCTGGCCTTTCAAGGTGAT---AAATGACAATGGGAAGCCTAAAGTCCAGG 3352636 Query 349500 TTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTA 349558 | ||||||||||| || || || | | | | || || || ||||| ||||||||| | Sbjct 3352637 TGGAATATAAAGGGGAGACTAAGGCTTTCTGT-CCAGAGGAGATTTCTTCAATGGTTCTG 3352695 Query 349559 GTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATT 349618 |||||||||| || |||||||| || | | | || | | || | |||| || ||| Sbjct 3352696 GTTAAAATGAGAGAGATTGCTGAGGCCTTTCTGGGACAGAAGGTGTCAAATGCAGTCATT 3352755 Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678 || || || || ||||| ||||| | ||| | || || |||||||||||| || Sbjct 3352756 ACGGTGCCTGCTTATTTCAATGACTCGCAGAGGCAAGCCACCAAAGATGCTGGCGTGATC 3352815 Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738 | || |||| |||| || || || ||||||||||| || ||||| ||||| || || Sbjct 3352816 TCTGGACTAAACATTCTGAGGATCATCAATGAACCCACAGCGGCAGCCATTGCCTACGGC 3352875 Query 349739 CTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798 || ||||| || ||| ||| | || || || ||| | ||||| || || Sbjct 3352876 CTGGATAAGGGGAAAAGAGGAGAGCGCAATGTGCTCATCTTCGATCTTGGTGGAGGCACC 3352935 Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858 || || || || | || || |||| || || || |||||||| ||||| || || || Sbjct 3352936 TTCGACGTGTCCATCCTGACCATTGAGGATGGCATATTTGAAGTGAAAGCCACAGCAGGG 3352995 Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAA 349918 || ||||| || ||||| || || ||||| ||||| | || || |||||| | || Sbjct 3352996 GACACACACCTCGGTGGGGAGGACTTTGACAATCGGATGGTCAGTCACTTTGTTGAGGAG 3353055 Query 349919 TTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGA 349978 |||||| | || || | || || | | ||| |||||| |||| | || | Sbjct 3353056 TTTAAGAGAAAACACAAGAAGGACATCGCCCAGAATAAAAGAGCAGTGCGGAGGCTGCGG 3353115 Query 349979 ACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATT 350038 || || ||||| | || ||| | |||| || || | | || | ||||| || Sbjct 3353116 ACAGCCTGTGAGAGAGCAAAGAGGACCTTGTCCTCCAGCTCTCAGGCTAGCATTGAGATC 3353175 Query 350039 GATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAA 350098 || ||||| ||| || | || |||| | | || || ||| | || || ||||| || Sbjct 3353176 GACTCTCTATTTGAGGGTATCGACTTCTATACCTCAATCACAAGGGCACGTTTTGAGGAG 3353235 Query 350099 TTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCA 350158 | |||||| || |||| |||| |||| || || || || | | |||| || Sbjct 3353236 CTCAACTCGGATCTCTTCAGAGGAACACTGGAGCCAGTTGAGAAGGCCCTGCAAGACGCT 3353295 Query 350159 AAAATGTCCAAAAATC--AGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTC 350216 || || | || || |||| ||||| | || | ||||||||||| ||| | || | Sbjct 3353296 AAGCTG--GATAAGTCCAAGATCCATGAAATTGTCCTGGTTGGTGGTTCCACAAGGATAC 3353353 Query 350217 CAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTTCTAGATCAATT 350275 | ||| | || || | || || || |||||||| ||||| | | ||| | || Sbjct 3353354 CCAAAATCCAGAAGCTCTTACAGGACTTCTTTAATGGTAAAGAGCTGAACAAGAGC-ATC 3353412 Query 350276 AATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTAT-TTTATCTG-GAA 350333 || || |||||||| || || ||||||||||| || ||||| |||| | || | || Sbjct 3353413 AACCCTGATGAAGCAGTGGCCTATGGTGCTGCAGTCCAGGCTGCTATCCTCATGGGCGAC 3353472 Query 350334 A--TAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGG 350391 | | |||| || | | ||| | | || || || || | || || || || || Sbjct 3353473 ACCTCAGAG----AACGTCCAGGATTTGCTGCTGCTGGACGTGGCGCCCCTGTCTCTGGG 3353528 Query 350392 ATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTAC 350451 | ||||| | || | ||| ||||| ||||| |||| | || | || || Sbjct 3353529 GATTGAAACCGCAGGAGGAGTTATGACCCCCCTTATCAAACGAAACACCACAATCCCCAC 3353588 Query 350452 AAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGT 350511 ||| || | || | || || |||| ||||||| ||||| | ||| ||||| || Sbjct 3353589 AAAGCAGACTCAGATCTTCTCCACATACTCAGATAACCAGCCTGGAGTACTGATTCAGGT 3353648 Query 350512 ATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAG 350571 | |||||||||| | || || || || || ||| || || ||| || | Sbjct 3353649 GTATGAAGGTGAAAGAGCCATGACCAAGGACAACAATCTGCTCGGGAGGTTTGAGCTCAC 3353708 Query 350572 TGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTC 350631 | || || || || || || || || ||||| || || | || || || ||| | Sbjct 3353709 AGGTATCCCGCCGGCTCCCAGGGGCGTGCCGCAGATAGAGGTAACCTTTGACATCGATGC 3353768 Query 350632 AAATGGTATTTTAAATGTTACCGCAGTTGAAAAA 350665 || ||||| ||||||| | || ||||| ||| Sbjct 3353769 CAACGGTATCCTAAATGTGTCGGCTGTTGACAAA 3353802 Score = 114 bits (126), Expect = 4e-20 Identities = 366/554 (66%), Gaps = 18/554 (3%) Strand=Plus/Minus Query 183246 ATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGAT 183305 || ||||| || || || |||||||| || || |||||||| ||||| || | | | | Sbjct 3353459 ATAGCAGCCTGGACTGCAGCACCATAGGCCACTGCTTCATCAGGGTTGAT-GCTCTTGTT 3353401 Query 183306 AAT-TCTTTGCCATTAAAAAATTC-TGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTG 183363 | ||||| |||||||| || || || ||| || | || |||| || || || || | Sbjct 3353400 CAGCTCTTTACCATTAAAGAAGTCCTGTAAGAGCTTCTGGA-TTTTGGGTATCCTTGTGG 3353342 Query 183364 AACCACCGACTAATACTACTTCATCGATATT--ACTTTTACTAATTTGTGAATCTTTTAA 183421 ||||||| || | || | ||||| ||| || |||| | | || | | |||| | Sbjct 3353341 AACCACCAACCAGGACAATTTCATGGATCTTGGACTTATCCAGCTTAGCG--TCTTGCAG 3353284 Query 183422 AACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCT 183481 | || ||||| || |||| ||| ||| || | ||| | ||| || || | Sbjct 3353283 GGCCTTCTCAACTGGCTCCAGTGTTCCTCTGAAGAGATCCGAGTTGAGCTCCTCAAAACG 3353224 Query 183482 TGCTCTAGTTAAAGATGaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGA 183541 ||| || || | || | | | ||||| ||||| | | ||| || || || ||||| Sbjct 3353223 TGCCCTTGTGATTGAGGTATAGAAGTCGATACCCTCAAATAGAGAGTCGATCTCAATGCT 3353164 Query 183542 TGTTTGTGTAGATG-ATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGAC 183600 | || | || || | || || || || || |||| ||||| ||||| | || | | Sbjct 3353163 AGCCTGAG-AGCTGGAGGACAAGGTCCTCTTTGCTCTCTCACAGGCTGTCCGCAGCCTCC 3353105 Query 183601 GTAATGATCTTGGATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAA 183660 | | || |||| ||| | | || || | || |||||||| ||||| || || || Sbjct 3353104 GCACTGCTCTTTTATTCTGGGCGATGTCCTTCTTGTGTTTTCTCTTAAACTCCTCAACAA 3353045 Query 183661 AATGT-TGAAGTAATC---TTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCA 183716 | || ||| ||| |||| |||| || || ||||| | ||||| || || || Sbjct 3353044 AGTGACTGACC--ATCCGATTGT--CAAAGTCCTCCCCACCGAGGTGTGTGTCCCCTGCT 3352989 Query 183717 GTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCA 183776 || ||||| ||||||||||| || || ||||| | | || || || || || || || Sbjct 3352988 GTGGCTTTCACTTCAAATATGCCATCCTCAATGGTCAGGATGGACACGTCGAAGGTGCCT 3352929 Query 183777 CCACCCAAATCAAA 183790 ||||| | ||| || Sbjct 3352928 CCACCAAGATCGAA 3352915 >seq460 Length=216781 Score = 176 bits (194), Expect = 1e-38 Identities = 371/548 (68%), Gaps = 4/548 (1%) Strand=Plus/Minus Query 349759 AGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAAC 349818 |||| |||| |||| || |||||| | |||||||| ||||||||||| || | | || Sbjct 116801 AGAACGAAATGTTCTCATCTTTGATCTTGGTGGTGGCACTTTTGATGTGTCCATCTTGAC 116742 Query 349819 ACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGA 349878 ||||||| || || |||||||| || | |||||||||||||| |||||||||||||| Sbjct 116741 CATTGAAGATGGGATCTTTGAAGTAAAGTCCACTGCTGGTGATACTCATCTTGGTGGAGA 116682 Query 349879 AGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAA 349937 || ||||| || || | ||| || || || ||| || || || |||| || | Sbjct 116681 GGACTTTGACAACCGCATGGTTAACCACTTCATTGCAGAGTTCAAACG-CAAGTACAAGA 116623 Query 349938 TTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTA 349997 || || | || || || || | ||||| || | ||||| |||||| | || | Sbjct 116622 AGGACATCAGTGACAACAAGAGGGCCGTTCGTCGTCTGCGCACTGCTTGTGAAAGGGCAA 116563 Query 349998 AGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCA 350057 |||| || | || || | ||||| || |||||||| || ||||| ||| || Sbjct 116562 AGCGCACCCTGTCTTCCAGCACCCAGGCCAGCATTGAAATCGACTCTCTCTATGAGGGAG 116503 Query 350058 AAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTA 350117 ||| |||| | || || || | ||||| ||||| || | || || || Sbjct 116502 TAGACTTCTACACTTCCATCACCAGGGCTCGATTTGAGGAGCTCAACGCTGACCTCTTCC 116443 Query 350118 GAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGA 350177 | | || |||| ||||| |||||| | || || |||||| |||| |||| Sbjct 116442 GTGGTACCCTGGACCCTGTTGAAAAATCCCTTCGTGACGCCAAAATGGACAAAGGCCAGA 116383 Query 350178 TTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTAT 350237 || |||| | || | |||||||| || || |||||||||||| | || | | || Sbjct 116382 TTCATGACATTGTCCTGGTTGGTGGCTCCACCCGTATTCCAAAAATCCAGAAACTTCTCC 116323 Query 350238 CTGAGTTTTTTAATGGCAAAGAACCTTCT-AGATCAATTAATCCAGATGAAGCTGTTGCA 350296 || || |||||||| || || | | ||| | || ||||||||||||||||| || Sbjct 116322 AGGACTTCTTTAATGGAAAGGAGCTGAATAAGAGC-ATCAATCCAGATGAAGCTGTGGCG 116264 Query 350297 TATGGTGC 350304 || || || Sbjct 116263 TACGGAGC 116256 >seq93 Length=1971969 Score = 138 bits (152), Expect = 3e-27 Identities = 361/544 (66%), Gaps = 10/544 (2%) Strand=Plus/Minus Query 349766 aaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAA 349825 ||| | || || |||||| | |||||||||||||||||||| ||| | | ||| |||| Sbjct 1911313 AATGTCCTCATCTTTGATCTTGGTGGTGGTACTTTTGATGTGTCAATCTTGACAATTGAG 1911254 Query 349826 GAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTT 349885 || || || |||||||| || || || || ||||| || || | ||||| ||||| ||| Sbjct 1911253 GACGGCATCTTTGAAGTCAAGGCCACAGCAGGTGACACGCACTTGGGTGGTGAAGACTTT 1911194 Query 349886 GATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATAT 349944 || || ||| | || || || || || || ||||| |||| ||||| || || Sbjct 1911193 GACAACCGTATGGTCAACCACTTCATTGCTGAGTTCAAGCG-CAAGTTTAAAAAGGACAT 1911135 Query 349945 TG---GAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCG 350001 || | | || | | || ||||||| || | || || ||||| ||||| ||||| Sbjct 1911134 TGTCAGCAACAAGC---GTGCTGTGCGTCGTCTGCGTACAGCTTGTGAGCGTGCAAAGCG 1911078 Query 350002 TTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGA 350061 || | || | || || || ||||| || || || || ||| |||| ||| Sbjct 1911077 CACCCTCTCCAGCAGCACGCAGGCCAGCATTGAGATCGACTCACTCTATGAAGGCACAGA 1911018 Query 350062 TTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGC 350121 |||| | || || || | ||||| |||||||| | | ||| || || | | Sbjct 1911017 CTTCTACACCTCCATCACCAGGGCTCGTTTTGAAGAGCTCAATGCGGACCTGTTCCGTGG 1910958 Query 350122 AACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGA 350181 |||| | || || ||||| || | | || || || ||| |||| ||||| | Sbjct 1910957 AACACTCGAGCCCGTGGAGAAGTCCCTGAGGGACGCCAAGATGGACAAATCCCAGATCCA 1910898 Query 350182 TGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGA 350241 ||| | || || || ||||| || |||||||| || || | ||| | | || || Sbjct 1910897 TGACATTGTCTTGGTGGGTGGATCCACACGTATCCCCAAGATCCAAAAACTTCTGCAGGA 1910838 Query 350242 GTTTTTTAATGGCAAAGAACCTTCT-AGATCAATTAATCCAGATGAAGCTGTTGCATATG 350300 || |||||||| || | | ||| | || || |||||||| ||||| || |||| Sbjct 1910837 CTTCTTTAATGGTCGTGACCTAAATAAGAGC-ATCAACCCAGATGAGGCTGTGGCTTATG 1910779 Query 350301 GTGC 350304 |||| Sbjct 1910778 GTGC 1910775 Score = 100 bits (110), Expect = 9e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 183681 TCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCG 183740 ||||| ||||||||||| || || || || || || || || || |||||||| || ||| Sbjct 1911192 TCAAAGTCTTCACCACCCAAGTGCGTGTCACCTGCTGTGGCCTTGACTTCAAAGATGCCG 1911251 Query 183741 TCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 || ||||| | || ||||| |||||||| ||||||||||| | |||||| Sbjct 1911252 TCCTCAATTGTCAAGATTGACACATCAAAAGTACCACCACCAAGATCAAA 1911301 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 |||| ||||| || || || || || || ||||| |||| || || || ||||||| Sbjct 1913026 ATGCAGTTATCACAGTTCCTGCTTACTTCAATGACTCCCAACGCCAAGCCACCAAAGATG 1912967 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727 |||| | || | || | ||||| || | || |||||||||||||| |||||||| | Sbjct 1912966 CTGGAACAATCTCTGGTCTCAATGTGCTGCGTATCATTAATGAACCCACAGCTGCAGCTA 1912907 Query 349728 TTGCATATGGGCTTGATAAAA 349748 |||||||||| || || |||| Sbjct 1912906 TTGCATATGGCCTCGACAAAA 1912886 >seq23 Length=4589928 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || ||||| || ||||| || || || || || ||||| | || || |||||| Sbjct 3277373 AGGACCAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 3277314 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | ||||| ||||| || || || || || ||| Sbjct 3277313 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 3277254 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || || || || || | ||| || || || || || || | ||| Sbjct 3277253 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 3277194 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| |||||||| Sbjct 3277193 TTCCCAGTGAGGGTCTTGACAAAGATCTGCAT 3277162 >seq10 Length=6656597 Score = 100 bits (110), Expect = 9e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236 |||||||| | ||| | ||||| || ||||| ||||| || ||| | || ||| | | Sbjct 5403146 ATTGATGAGATTGTTCTGGTTGGCGGCTCTACTCGTATCCCTAAAATCCAGCAGCTGGTG 5403087 Query 350237 TCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCA 350296 ||||| || |||||||||||||| || || |||||||| ||||| ||||| || Sbjct 5403086 AAGGAGTTCTTCAATGGCAAAGAACCATCCAGGGGCATTAATCCTGATGAGGCTGTGGCT 5403027 Query 350297 TATGGTGCTGCTGTTCAGGC 350316 || ||||||||||| ||||| Sbjct 5403026 TACGGTGCTGCTGTGCAGGC 5403007 Score = 98.7 bits (108), Expect = 3e-15 Identities = 121/162 (75%), Gaps = 5/162 (3%) Strand=Plus/Minus Query 349250 AATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTT 349309 |||| ||||| || || ||||| ||||| || |||||| | | || || |||||||| Sbjct 5404455 AATGGCCGTGTGGAGATCATTGCCAATGACCAGGGTAACCGCATCACCCCTTCATACGTG 5404396 Query 349310 GCATTTACC---GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTG-CTGC 349365 || || ||| || ||||||| ||||||||||| |||| || |||| ||||| | | Sbjct 5404395 GCCTTCACCAGTGAGGGTGAGCGTCTGATTGGTGATGCTGCTAAGAATC-AGCTGACCTC 5404337 Query 349366 TAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGG 349407 ||| ||| | || || || |||||||| || |||| ||||| Sbjct 5404336 TAACCCAGAGAACACCGTCTTTGATGCCAAAAGACTGATTGG 5404295 >seq26 Length=4473900 Score = 84.2 bits (92), Expect = 7e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607 |||| || || || || || || | || || ||||| ||||| |||||||||||||||| Sbjct 562408 CTTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCATCCTCAAGCTGTTTTCCAGCAAAGA 562349 Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCT 140636 | ||||| |||||||| ||||| |||||| Sbjct 562348 TCAGACGCTGCTGATCGGGAGGGATTCCT 562320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515194740172619