Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kryptolebias_20marmoratus_20[refseq_20GCF_5F001649575.1_202016-05- 22] 3,073 sequences; 680,366,784 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq15 107 2e-18 >seq15 Length=5448219 Score = 107 bits (118), Expect = 2e-18 Identities = 132/179 (74%), Gaps = 1/179 (1%) Strand=Plus/Plus Query 32653 AAATCAGAATAGCCAGAGCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAG 32712 ||| |||| | || |||| |||||| ||||| |||| || || || |||||||| | Sbjct 3441932 AAACCAGA-TGGCAGGAGCTCTGTGGTGGTATTTCGTCTCCAAGGGCATCGAATATCTGG 3441990 Query 32713 ATACTATTTTCTTCATAATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACC 32772 | || | || || || |||| || ||||| ||||| |||| ||| ||||||| |||| Sbjct 3441991 ACACAGTGTTTTTTATCCTGAGGAAAAAATTCAACCAGGTTACCTTCCTGCACGTCTACC 3442050 Query 32773 ACCATTTTACCATGTTTACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACAG 32831 |||| | |||||||| || | | ||||| || || || ||| | |||||||||||| Sbjct 3442051 ACCACTGCACCATGTTCACGCTCTGGTGGATCGGCATCAAGTGGGTGGCAGGAGGACAG 3442109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603157630317520