Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labeotropheus_20fuelleborni_20[genbank_20GCA_5F000150875.1_202008- 07-09] 58,245 sequences; 70,858,381 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq31185 168 1e-37 seq15313 167 4e-37 seq57082 159 5e-35 >seq31185 Length=1000 Score = 168 bits (186), Expect = 1e-37 Identities = 200/271 (74%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| |||||||| || | || || ||||||||||| || |||||||| || || || Sbjct 464 CGCCAAGCGTCACCGTAAGGTGCTCCGTGATAACATCCAGGGTATCACCAAACCCGCGAT 405 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||||||||| ||||| ||||| |||||| |||| || || |||| || |||| Sbjct 404 CCGTCGTCTGGCTCGCCGTGGCGGAGTGAAGCGTATCTCCGGTCTGATCTACGAGGAGAC 345 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || ||||| | || | ||| ||| |||| ||||||| | ||| || || Sbjct 344 CCGCGGAGTGCTGAAGGTGTTTTTGGAGAACGTCATCCGTGATGCTGTTACCTACACGGA 285 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||| | |||||||| ||| |||||||| | || ||||| |||| | || || Sbjct 284 GCACGCTAAGAGGAAGACTGTGACCGCCATGGATGTGGTGTATGCTCTGAAGAGGCAGGG 225 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 ||| | | || || ||||| ||||| || Sbjct 224 CCGCACTCTGTACGGCTTTGGCGGTTAAACT 194 >seq15313 Length=3312 Score = 167 bits (184), Expect = 4e-37 Identities = 187/250 (75%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| ||||||||||| || ||||| |||||||||||||| || |||||||| |||||| Sbjct 3083 CTTCGTGATAACATCCAGGGCATCACTAAGCCAGCTATCCGCCGCCTGGCTCGCCGTGGT 3024 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || |||||| | ||||| || |||| || |||| |||| || |||||| | || Sbjct 3023 GGTGTGAAGCGTATTTCTGGTCTGATCTACGAGGAGACCCGTGGCGTGTTGAAGGTGTTT 2964 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 || ||| ||| |||| || || || ||| ||||||||||| || | ||||| ||| Sbjct 2963 CTGGAGAACGTCATCCGCGACGCCGTCACCTACACCGAGCACGCCAAGAGAAAGACCGTC 2904 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 ||| |||||||| | || || || | || | || ||||| | | || || ||||| Sbjct 2903 ACCGCCATGGATGTGGTGTACGCTCTCAAGAGACAGGGCCGCACTCTGTACGGCTTTGGT 2844 Query 16694 AGTTAATCTT 16703 ||||| ||| Sbjct 2843 GGTTAAGCTT 2834 >seq57082 Length=2273 Score = 159 bits (176), Expect = 5e-35 Identities = 198/271 (73%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| |||| ||| || | | ||| || ||||||||||| || |||||||| || ||||| Sbjct 518 CGCCAAGCATCACCGTAAAGTTCTCCGTGATAACATCCAGGGCATCACCAAACCCGCTAT 459 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||||||||| ||||| ||||| |||||| | | || || |||| || |||| Sbjct 458 CCGTCGTCTGGCTCGCCGTGGCGGAGTGAAGCGTATTTACGGTCTGATCTACGAGGAGAC 399 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | ||| | ||||| ||| ||| |||| |||||| || || || || Sbjct 398 CCGCGGTGTGCTCAAGGTGTTCCTGGAGAACGTCATCCGTGATGCCGTCACGTACACTGA 339 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | |||||||| ||| |||||||| | || || || |||| | || || Sbjct 338 GCACGCCAAGAGGAAGACTGTGACCGCCATGGATGTGGTGTACGCTCTGAAGAGGCAGGG 279 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 ||| | | || || || || ||||| || Sbjct 278 CCGCACTCTGTACGGCTTCGGCGGTTAAACT 248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79021946188785