Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labeotropheus_20fuelleborni_20[genbank_20GCA_5F000150875.1_202008- 07-09] 58,245 sequences; 70,858,381 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq17522 255 7e-63 >seq17522 Length=608 Score = 255 bits (282), Expect = 7e-63 Identities = 418/606 (69%), Gaps = 21/606 (3%) Strand=Plus/Plus Query 167573 CAGCTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGATTT 167632 || || | |||||| ||| || || || || || || | |||| |||||| ||||| Sbjct 3 CAACTCGTGGGACTTTGGAACTTCGTTGCACTTCAGGGTGTATTTGGTCTCATCGGATTC 62 Query 167633 ATGCTTCGGCAATTTGAGATAAGTAGACTAGTAGGTATCCGTCCTTACAATGCGATTGCT 167692 ||||| || ||||||||||| |||| ||||||||| | |||||||| || | || Sbjct 63 ATGCTCCGTCAATTTGAGATTGCAGGACTTGTAGGTATCAGACCTTACAACGCACTCGCA 122 Query 167693 TTTTCTGGTCCGATTGCTGTCTTTGTGTCTGTTTTTCTCATCTATCCTCTCGGACAGTCC 167752 || |||| | || | |||||| | ||||| |||||||| | || || | Sbjct 123 TTCTCTGCTGTAATCTCAGTCTTTACAAGCATCTTTCTGATCTATCCATTAGGTCAACAC 182 Query 167753 AGTTGGTTCTTTGCACCGTCGTTTGGTGTTGCAGCGATATTTAGATTCCTACTATTCCTA 167812 ||||||||||| ||||| || |||||||| |||| || || | | | || || | Sbjct 183 AGTTGGTTCTTCGCACCTTCATTTGGTGTCACAGCAATCTTCCGTTATATTCTCTTTATC 242 Query 167813 CAGGGTTTCCATAACTGGACGCTCAACCCTTTCCATATGATGGGAGTTGCTGGTATCCTA 167872 | ||||| ||||| || ||||| || || ||||||||||| || || ||||| || Sbjct 243 CCAGGTTTTCATAATATAACTCTCAATCCATTTCATATGATGGGTGTAGCAGGTATATTA 302 Query 167873 GGCGGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACTCTGTATGA---- 167928 | || ||||| || | |||||| ||||| | || || |||| || ||||||| Sbjct 303 CGAGGAGCATTACTCTGTGCAATACATGGAGCAACTGTTCAGAACACCTTGTATGAAGAC 362 Query 167929 --------------AGATGGTGAG---CAAGCAAACACTTTCAAAGCATTTGATACGACT 167971 ||| ||| || ||| | | || ||| ||||| ||| | || Sbjct 363 ACATCACAATACACAGAGGGTAAGATTCAATCTACAACCTTCCGTGCATTCGATCCTACA 422 Query 167972 CAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATTCTGGTCTCAAATTTTTGGT 168031 || ||||| |||||||| ||| | || || ||| |||||||||| || || |||||| Sbjct 423 CAAGAAGAAGAAACTTACAGTATGATTACAGCAAACAGATTCTGGTCACAGATCTTTGGT 482 Query 168032 ATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTTCGTTCCTGTCATGGGA 168091 | || ||| ||||| | | || |||||| ||||||| |||||||||||||||||| Sbjct 483 GTAGCATTCTCTAATAAAAGATTCTTACACTTCCTTATGCTCTTCGTTCCTGTCATGGGA 542 Query 168092 CTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCTTCGTGCTTATGACTTT 168151 | |||||| || ||||||||| | ||||| |||||||| || || || ||||| Sbjct 543 ATGTGGACATCATCAATTGGTATCGTAGGTCTTGCACTTAACCTCATAGCATACCACTTT 602 Query 168152 GTGTCT 168157 || ||| Sbjct 603 GTATCT 608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566819019652000