Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labeotropheus_20fuelleborni_20[genbank_20GCA_5F000150875.1_202008- 07-09] 58,245 sequences; 70,858,381 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq17522 700 0.0 >seq17522 Length=608 Score = 700 bits (776), Expect = 0.0 Identities = 520/608 (86%), Gaps = 0/608 (0%) Strand=Plus/Plus Query 170800 TACAACTCGGAGGTTTATGGAACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTT 170859 ||||||||| || | |||||||| || ||| | || || || ||||| ||||| || | Sbjct 1 TACAACTCGTGGGACTTTGGAACTTCGTTGCACTTCAGGGTGTATTTGGTCTCATCGGAT 60 Query 170860 TCATGCTCAGACAATTTGAGATCGCAGGACTTGTAGGCATCAGACCTTACAACGCACTCG 170919 |||||||| | ||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct 61 TCATGCTCCGTCAATTTGAGATTGCAGGACTTGTAGGTATCAGACCTTACAACGCACTCG 120 Query 170920 CATTCTCTGCTGTTATCGCAGTCTTCACTAGCATCTTTCTGATCTATCCACTAGGTCAGC 170979 ||||||||||||| ||| ||||||| || ||||||||||||||||||||| ||||||| | Sbjct 121 CATTCTCTGCTGTAATCTCAGTCTTTACAAGCATCTTTCTGATCTATCCATTAGGTCAAC 180 Query 170980 ACAGTTGGTTCTTCGCACCATCATTCGGTGTCGCAGCAATTTTTCGTTATATCTTATTCA 171039 ||||||||||||||||||| ||||| |||||| ||||||| || |||||||| | || | Sbjct 181 ACAGTTGGTTCTTCGCACCTTCATTTGGTGTCACAGCAATCTTCCGTTATATTCTCTTTA 240 Query 171040 TACAAGGTTTCCACAACATTACATTGAATCCATTTCACATGATGGGTGTTGCAGGAATAC 171099 | | |||||| || || || || | ||||||||||| ||||||||||| ||||| ||| Sbjct 241 TCCCAGGTTTTCATAATATAACTCTCAATCCATTTCATATGATGGGTGTAGCAGGTATAT 300 Query 171100 TAGGTGGAGCATTATTATGTGCCATTCATGGTGCAACAGTGCAGAACACATTGTATGAAG 171159 || | ||||||||| | ||||| || ||||| ||||| || |||||||| |||||||||| Sbjct 301 TACGAGGAGCATTACTCTGTGCAATACATGGAGCAACTGTTCAGAACACCTTGTATGAAG 360 Query 171160 ACACATCAGTTTATACTGATAATAAAATTCAAAGCACAACATTCCGTGCCTTTGATCCTA 171219 |||||||| || || || ||| |||||| ||||| |||||||| || ||||||| Sbjct 361 ACACATCACAATACACAGAGGGTAAGATTCAATCTACAACCTTCCGTGCATTCGATCCTA 420 Query 171220 CACAGGAAGAAGAAACTTACAGTATGATTACAGCAAACAGATTCTGGTCACAGATATTTG 171279 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 421 CACAAGAAGAAGAAACTTACAGTATGATTACAGCAAACAGATTCTGGTCACAGATCTTTG 480 Query 171280 GTATTGCTTTCTCTAACAAAAGATTTTTACACTTCCTTATGTTGTTCGTTCCTGTCATGG 171339 || | || |||||||| |||||||| ||||||||||||||| | |||||||||||||||| Sbjct 481 GTGTAGCATTCTCTAATAAAAGATTCTTACACTTCCTTATGCTCTTCGTTCCTGTCATGG 540 Query 171340 GTATGTGGACATCATCTATAGGTATCGTAGGTCTAGCACTTAACCTCAGAGCATACGATT 171399 | |||||||||||||| || |||||||||||||| ||||||||||||| ||||||| | | Sbjct 541 GAATGTGGACATCATCAATTGGTATCGTAGGTCTTGCACTTAACCTCATAGCATACCACT 600 Query 171400 TTGTATCT 171407 |||||||| Sbjct 601 TTGTATCT 608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578791096880800