Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labeotropheus_20fuelleborni_20[genbank_20GCA_5F000150875.1_202008- 07-09] 58,245 sequences; 70,858,381 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq17522 230 3e-55 >seq17522 Length=608 Score = 230 bits (254), Expect = 3e-55 Identities = 407/589 (69%), Gaps = 31/589 (5%) Strand=Plus/Plus Query 183454 CAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGGTGCCTTTGCTCTCATTGGTTTC 183513 ||||| | |||||| ||||| || || ||||| || |||| |||| |||||| || ||| Sbjct 3 CAACTCGTGGGACTTTGGAACTTCGTTGCACTTCAGGGTGTATTTGGTCTCATCGGATTC 62 Query 183514 ATGCTTCGACAGTTTGAACTTGCTCG-CTTGATTGGTATCCGTCCTTACAATGCTATTGC 183572 ||||| || || ||||| |||| | |||| | |||||| | |||||||| || | || Sbjct 63 ATGCTCCGTCAATTTGAGATTGCAGGACTTG-TAGGTATCAGACCTTACAACGCACTCGC 121 Query 183573 GTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCTTATCTATCCACTGGGTCAGTC 183632 ||||||| | || | || ||| || | || || ||||||||| | ||||| Sbjct 122 ATTCTCTGCTGTAATCTCAGTCTTTACAAGCATCTTTCTGATCTATCCATTAGGTCAACA 181 Query 183633 TTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATCTT----TAGATTCCTATTGT 183688 |||||||| |||||| || || || |||||||||| || |||| | || Sbjct 182 CAGTTGGTTCTTCGCACCTTCATTTGGTGTCACAGCAATCTTCCGTTATATTC-TCTTTA 240 Query 183689 TCCTTCAGGGTTTCCACAACTGGACGTTAAACCCCTTCCATATGATGGGAGTTGCTGGTA 183748 ||| |||| |||| | || || | || || || ||||||||||| || || |||| Sbjct 241 TCC--CAGGTTTTC-ATAATATAACTCTCAATCCATTTCATATGATGGGTGTAGCAGGTA 297 Query 183749 TACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCACAGTAGAGAATACATTGTATG 183808 || || |||||||| ||||| |||| || ||||| | || || |||| || ||||||| Sbjct 298 TATTACGAGGAGCATTACTCTGTGCAATACATGGAGCAACTGTTCAGAACACCTTGTATG 357 Query 183809 AAGA-----------------TGG---AGA-ACAAGCAAACACATTCAAGGCATTTGATT 183847 |||| || ||| ||| | | || ||| ||||| ||| Sbjct 358 AAGACACATCACAATACACAGAGGGTAAGATTCAATCTACAACCTTCCGTGCATTCGATC 417 Query 183848 CCACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCT 183907 | || ||||||||||| || || |||| ||||||| || | ||||||||||| |||| Sbjct 418 CTACACAAGAAGAAGAAACTTACAGTATGATTACAGCAAACAGATTCTGGTCACAGATCT 477 Query 183908 TCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCA 183967 | || || || || ||||| | | || |||||| ||||| | || |||||||||| Sbjct 478 TTGGTGTAGCATTCTCTAATAAAAGATTCTTACACTTCCTTATGCTCTTCGTTCCTGTCA 537 Query 183968 TGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAATCT 184016 |||| | ||| || || ||||| ||| | || ||||| ||||| || Sbjct 538 TGGGAATGTGGACATCATCAATTGGTATCGTAGGTCTTGCACTTAACCT 586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611250647081000