Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labeotropheus_20fuelleborni_20[genbank_20GCA_5F000150875.1_202008- 07-09] 58,245 sequences; 70,858,381 total letters Query= NC_019444.1 Length=176043 Score E Sequences producing significant alignments: (Bits) Value seq17522 239 5e-58 >seq17522 Length=608 Score = 239 bits (264), Expect = 5e-58 Identities = 405/588 (69%), Gaps = 29/588 (5%) Strand=Plus/Plus Query 164880 CAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGTTTC 164939 ||||| | |||||| ||||| ||||| || || || |||| || | || || || ||| Sbjct 3 CAACTCGTGGGACTTTGGAACTTCGTTGCACTTCAGGGTGTATTTGGTCTCATCGGATTC 62 Query 164940 ATGCTCCGCCAGTTTGAGCTGGCACGTCTCATTGGTATCCGTCCTTACAATGCTATTGCG 164999 |||||||| || |||||| | ||| | || | |||||| | |||||||| || | || Sbjct 63 ATGCTCCGTCAATTTGAGATTGCAGGACTTGTAGGTATCAGACCTTACAACGCACTCGCA 122 Query 165000 TTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCACTGGGTCAGTCC 165059 ||||||| | || | || ||| ||| |||| || ||||| ||| | ||||| | Sbjct 123 TTCTCTGCTGTAATCTCAGTCTTTACAAGCATCTTTCTGATCTATCCATTAGGTCAACAC 182 Query 165060 AGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCT----TTAGATTCCTGTTGTT 165115 |||||||| ||||| || || ||||| || ||||||||| ||| |||| | || Sbjct 183 AGTTGGTTCTTCGCACCTTCATTTGGTGTCACAGCAATCTTCCGTTATATTC----TCTT 238 Query 165116 CCTTCAAGGATTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGTGTTGCAGGTAT 165175 | | ||| || || || || ||||| || || |||||||||||||| |||||||| Sbjct 239 TATCCCAGGTTTTCATAATATAACTCTCAATCCATTTCATATGATGGGTGTAGCAGGTAT 298 Query 165176 CTTGGGAGGAGCATTGCTATCTGCTATTCATGGAGTCACAGTTGAAAATACATTATACGA 165235 || |||||||||| || | ||| || ||||||| || ||| | || || || || || Sbjct 299 ATTACGAGGAGCATTACTCTGTGCAATACATGGAGCAACTGTTCAGAACACCTTGTATGA 358 Query 165236 GG----------ATGGAGAGCAGGCAA-AT----------ACCTTTAAGGCGTTTGATTC 165274 | || | || || || || ||||| || || ||| | Sbjct 359 AGACACATCACAATACACAGAGGGTAAGATTCAATCTACAACCTTCCGTGCATTCGATCC 418 Query 165275 GACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTT 165334 ||||| |||||||| ||||| |||| | || |||||| | |||||||| |||||||| Sbjct 419 TACACAAGAAGAAGAAACTTACAGTATGATTACAGCAAACAGATTCTGGTCACAGATCTT 478 Query 165335 CGGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTAT 165394 || | || || ||||| || | | | || || | ||| | || || ||||| || Sbjct 479 TGGTGTAGCATTCTCTAATAAAAGATTCTTACACTTCCTTATGCTCTTCGTTCCTGTCAT 538 Query 165395 GGGTCTTTGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCT 165442 ||| | |||||||| || ||||| || | |||||||| || ||||| Sbjct 539 GGGAATGTGGACATCATCAATTGGTATCGTAGGTCTTGCACTTAACCT 586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562799548210600