Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labeotropheus_20fuelleborni_20[genbank_20GCA_5F000150875.1_202008- 07-09] 58,245 sequences; 70,858,381 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq17522 228 9e-55 >seq17522 Length=608 Score = 228 bits (252), Expect = 9e-55 Identities = 412/606 (68%), Gaps = 21/606 (3%) Strand=Plus/Plus Query 162390 CAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTC 162449 ||||| | |||||| |||| || || || || || || | |||| || || || ||| Sbjct 3 CAACTCGTGGGACTTTGGAACTTCGTTGCACTTCAGGGTGTATTTGGTCTCATCGGATTC 62 Query 162450 ATGCTTCGCCAGTTTGAACTGGCACGACTTATCGGTATTCGTCCTTACAATGCTATTGCT 162509 ||||| || || ||||| | ||| ||||| | ||||| | |||||||| || | || Sbjct 63 ATGCTCCGTCAATTTGAGATTGCAGGACTTGTAGGTATCAGACCTTACAACGCACTCGCA 122 Query 162510 TTCTCAGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATCTATCCTTTGGGACAATCG 162569 ||||| | | || | || || || | ||||| |||||||| || || ||| Sbjct 123 TTCTCTGCTGTAATCTCAGTCTTTACAAGCATCTTTCTGATCTATCCATTAGGTCAACAC 182 Query 162570 TCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTC 162629 |||||||||||||| || || || ||| ||||||||||||| | | ||||| || Sbjct 183 AGTTGGTTCTTCGCACCTTCATTTGGTGTCACAGCAATCTTCCGTTATATTCTCTTTATC 242 Query 162630 CAAGGGTTCCATAACTGGACGCTAAATCCTTTTCACATGATGGGCGTAGCAGGTATCCTT 162689 | ||| || ||||| || || ||||| ||||| |||||||| ||||||||||| | Sbjct 243 CCAGGTTTTCATAATATAACTCTCAATCCATTTCATATGATGGGTGTAGCAGGTATATTA 302 Query 162690 GGTGGTGCATTGCTCTCTGCTATTCATGGAGTGACAGTTGAAAATACACTGTACGAAGA- 162748 | || ||||| |||| ||| || ||||||| || ||| | || || |||| ||||| Sbjct 303 CGAGGAGCATTACTCTGTGCAATACATGGAGCAACTGTTCAGAACACCTTGTATGAAGAC 362 Query 162749 ----------------TGGCGAA----CAAGCAAACACTTTTAAAGCATTTGACTCCACA 162788 || || ||| | | || || ||||| || | ||| Sbjct 363 ACATCACAATACACAGAGGGTAAGATTCAATCTACAACCTTCCGTGCATTCGATCCTACA 422 Query 162789 CAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGGTCACAGATTTTCGGT 162848 || || |||||||| || ||| |||| || ||| | |||||||||||||| || ||| Sbjct 423 CAAGAAGAAGAAACTTACAGTATGATTACAGCAAACAGATTCTGGTCACAGATCTTTGGT 482 Query 162849 ATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTTGTTCCCGTCATGGGT 162908 | || || ||| || | | || || ||| |||||||||| ||||| |||||||| Sbjct 483 GTAGCATTCTCTAATAAAAGATTCTTACACTTCCTTATGCTCTTCGTTCCTGTCATGGGA 542 Query 162909 CTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTTCGTGCTTACGACTTT 162968 | |||||| || || ||||| | || || || || || || || ||| ||||| Sbjct 543 ATGTGGACATCATCAATTGGTATCGTAGGTCTTGCACTTAACCTCATAGCATACCACTTT 602 Query 162969 GTATCT 162974 |||||| Sbjct 603 GTATCT 608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547348405804200