Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labeotropheus_20fuelleborni_20[genbank_20GCA_5F000150875.1_202008- 07-09] 58,245 sequences; 70,858,381 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq17522 262 5e-65 >seq17522 Length=608 Score = 262 bits (290), Expect = 5e-65 Identities = 419/605 (69%), Gaps = 21/605 (3%) Strand=Plus/Minus Query 66747 GATACAAAGTCATAAGCACGAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTC 66806 |||||||||| || || ||||| || |||||||| | ||||| || || |||| Sbjct 607 GATACAAAGTGGTATGCTATGAGGTTAAGTGCAAGACCTACGATACCAATTGATGATGTC 548 Query 66807 CAAAGACCCATAACAGGAACAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAAC 66866 || | ||||| |||||||| || | ||||| ||| || || | || ||||| || Sbjct 547 CACATTCCCATGACAGGAACGAAGAGCATAAGGAAGTGTAAGAATCTTTTATTAGAGAAT 488 Query 66867 GCAATACCAAAGATCTGAGACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCC 66926 || | |||||||||||| |||||||| | |||||| |||| ||| |||||||||||| Sbjct 487 GCTACACCAAAGATCTGTGACCAGAATCTGTTTGCTGTAATCATACTGTAAGTTTCTTCT 428 Query 66927 TCTTGAGTAGAGTCGAATGCTTTGAAAGTGTTTGCTTGT---TCACCATCT--------- 66974 ||||| |||| |||||||| ||| || | | ||| | ||| ||| Sbjct 427 TCTTGTGTAGGATCGAATGCACGGAAGGTTGTAGATTGAATCTTACCCTCTGTGTATTGT 368 Query 66975 ---------TCATACAGAGTATTCTCTACTGTAACACCATGAATGGCAGAAAGCAATGCA 67025 ||||||| || |||| || || | ||||| || ||| | || ||||| Sbjct 367 GATGTGTCTTCATACAAGGTGTTCTGAACAGTTGCTCCATGTATTGCACAGAGTAATGCT 308 Query 67026 CCACCCAGGATACCTGCTACACCCATCATATGAAACGGGTTCAAGGTCCAGTTATGGAAT 67085 || | | |||||||||||||||||||||||||| || || | || ||||| || Sbjct 307 CCTCGTAATATACCTGCTACACCCATCATATGAAATGGATTGAGAGTTATATTATGAAAA 248 Query 67086 CCTTGTAGGAAGAGAAGGAATCGAAAGATTGCTGAGACCCCGAAAGATGGAGCGAAAAAC 67145 ||| | | ||||||| | || |||||||||| ||| || || || || ||||| ||| Sbjct 247 CCTGGGATAAAGAGAATATAACGGAAGATTGCTGTGACACCAAATGAAGGTGCGAAGAAC 188 Query 67146 CAACTCGATTGACCCAGAGGGTAGATGAGAAAGACACTAACAAAAACAGCGATAGGACCA 67205 ||||| |||||| | || ||||| ||||||| || ||| || | ||| | || Sbjct 187 CAACTGTGTTGACCTAATGGATAGATCAGAAAGATGCTTGTAAAGACTGAGATTACAGCA 128 Query 67206 GAGAACGCAATAGCATTGTAGGGACGGATACCGATGAGACGTGCCAGTTCAAACTGGCGA 67265 ||||| || | || ||||| || | |||||| | || | ||| | ||||| || || Sbjct 127 GAGAATGCGAGTGCGTTGTAAGGTCTGATACCTACAAGTCCTGCAATCTCAAATTGACGG 68 Query 67266 AGCATGAAACCAATTAGAGCGAAAGCCCCGTGGAGCGCCACAAAATTCCAGAGTCCTCCA 67325 |||||||| || || ||| | || | || || || || || || ||||| ||||| | Sbjct 67 AGCATGAATCCGATGAGACCAAATACACCCTGAAGTGCAACGAAGTTCCAAAGTCCCACG 8 Query 67326 AGTTG 67330 ||||| Sbjct 7 AGTTG 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571637908643400