Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labeotropheus_20fuelleborni_20[genbank_20GCA_5F000150875.1_202008- 07-09] 58,245 sequences; 70,858,381 total letters Query= NC_021530.1 Length=171407 Score E Sequences producing significant alignments: (Bits) Value seq17522 248 1e-60 >seq17522 Length=608 Score = 248 bits (274), Expect = 1e-60 Identities = 407/588 (69%), Gaps = 29/588 (5%) Strand=Plus/Plus Query 159567 CAACTTGGGGGATTATGGAATTTTGTGGCACTCCACGGTGCCTTCGCCCTAATTGGTTTC 159626 ||||| | |||| | ||||| || || ||||| || |||| || | || || || ||| Sbjct 3 CAACTCGTGGGACTTTGGAACTTCGTTGCACTTCAGGGTGTATTTGGTCTCATCGGATTC 62 Query 159627 ATGCTCCGTCAGTTTGAACTGGCACGTCTCATTGGTATCCGTCCTTACAATGCTATTGCG 159686 ||||||||||| ||||| | ||| | || | |||||| | |||||||| || | || Sbjct 63 ATGCTCCGTCAATTTGAGATTGCAGGACTTGTAGGTATCAGACCTTACAACGCACTCGCA 122 Query 159687 TTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTCATCTACCCATTGGGTCAGTCC 159746 ||||||| | || | || ||| ||| |||| || ||||| ||||| ||||| | Sbjct 123 TTCTCTGCTGTAATCTCAGTCTTTACAAGCATCTTTCTGATCTATCCATTAGGTCAACAC 182 Query 159747 AGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCT----TTAGATTCCTGTTGTT 159802 |||||||| ||||| || || ||||| || ||||||||| ||| |||| | || Sbjct 183 AGTTGGTTCTTCGCACCTTCATTTGGTGTCACAGCAATCTTCCGTTATATTC----TCTT 238 Query 159803 CCTTCAAGGATTTCACAACTGGACGTTAAATCCCTTCCATATGATGGGAGTTGCTGGTAT 159862 | | ||| ||||| || || | ||||| || ||||||||||| || || ||||| Sbjct 239 TATCCCAGGTTTTCATAATATAACTCTCAATCCATTTCATATGATGGGTGTAGCAGGTAT 298 Query 159863 ACTAGGTGGAGCACTACTCAGTGCCATCCATGGCGTTACTGTAGAGAACACACTGTATGA 159922 | || | |||||| ||||| |||| || ||||| | ||||| ||||||| ||||||| Sbjct 299 ATTACGAGGAGCATTACTCTGTGCAATACATGGAGCAACTGTTCAGAACACCTTGTATGA 358 Query 159923 AGA-----------------TGG---AGA-ACAAGCAAATACCTTTAAGGCGTTTGATTC 159961 ||| || ||| ||| | | ||||| || || ||| | Sbjct 359 AGACACATCACAATACACAGAGGGTAAGATTCAATCTACAACCTTCCGTGCATTCGATCC 418 Query 159962 AACTCAAGAGGAGGAGACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTT 160021 || ||||| || || |||||| |||| | || |||||| | |||||||| |||||||| Sbjct 419 TACACAAGAAGAAGAAACTTACAGTATGATTACAGCAAACAGATTCTGGTCACAGATCTT 478 Query 160022 CGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTCATGTTGTTTGTGCCTGTTAT 160081 ||| | || || ||||| || | | | || ||| | ||| | || || ||||| || Sbjct 479 TGGTGTAGCATTCTCTAATAAAAGATTCTTACACTTCCTTATGCTCTTCGTTCCTGTCAT 538 Query 160082 GGGTCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCTTAATCT 160129 ||| | |||||||| || ||||| || | || ||||| ||||| || Sbjct 539 GGGAATGTGGACATCATCAATTGGTATCGTAGGTCTTGCACTTAACCT 586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547975149163400