Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labeotropheus_20fuelleborni_20[genbank_20GCA_5F000150875.1_202008- 07-09] 58,245 sequences; 70,858,381 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq17522 212 8e-50 >seq17522 Length=608 Score = 212 bits (234), Expect = 8e-50 Identities = 396/584 (68%), Gaps = 21/584 (4%) Strand=Plus/Plus Query 179212 CAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTC 179271 ||||| | |||||| ||||| ||||| || || || |||| || | || || |||||| Sbjct 3 CAACTCGTGGGACTTTGGAACTTCGTTGCACTTCAGGGTGTATTTGGTCTCATCGGATTC 62 Query 179272 ATGCTTCGTCAGTTTGAACTGGCACGTCTCATCGGTATCCGTCCTTACAATGCGATTGCT 179331 ||||| ||||| ||||| | ||| | || | |||||| | |||||||| || | || Sbjct 63 ATGCTCCGTCAATTTGAGATTGCAGGACTTGTAGGTATCAGACCTTACAACGCACTCGCA 122 Query 179332 TTTACTGGTCCTATTGCCGTATTCGTTAGTGTATTTCTCATCTACCCACTTGGACAATCC 179391 || ||| | || | || || || | ||||| ||||| ||| | || ||| | Sbjct 123 TTCTCTGCTGTAATCTCAGTCTTTACAAGCATCTTTCTGATCTATCCATTAGGTCAACAC 182 Query 179392 AGTTGGTTCTTTGCGCCATCGTTTGGTGTTGCGGCGATCTTTAGATTCCTACTTTTCTTA 179451 ||||||||||| || || || |||||||| | || ||||| | | | || || | Sbjct 183 AGTTGGTTCTTCGCACCTTCATTTGGTGTCACAGCAATCTTCCGTTATATTCTCTTTATC 242 Query 179452 CAAGGTTTCCACAACTGGACACTCAACCCCTTTCACATGATGGGAGTTGCAGGTATCCTG 179511 | |||||| || || || ||||| || ||||| |||||||| || |||||||| | Sbjct 243 CCAGGTTTTCATAATATAACTCTCAATCCATTTCATATGATGGGTGTAGCAGGTATATTA 302 Query 179512 GGTGGTGCTCTGCTCTCTGCTATTCATGGAGTAACTGTAGAGAATACATTGTATGAAGA- 179570 | || || | |||| ||| || ||||||| |||||| |||| || ||||||||||| Sbjct 303 CGAGGAGCATTACTCTGTGCAATACATGGAGCAACTGTTCAGAACACCTTGTATGAAGAC 362 Query 179571 ----------------TGG---AGA-ACAAGCAAACACATTTAAAGCGTTCGACTCTACG 179610 || ||| ||| | | || || || ||||| |||| Sbjct 363 ACATCACAATACACAGAGGGTAAGATTCAATCTACAACCTTCCGTGCATTCGATCCTACA 422 Query 179611 CAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGATCTTCGGG 179670 ||||| || || || || |||| ||||||| ||| | || ||||| |||||||| || Sbjct 423 CAAGAAGAAGAAACTTACAGTATGATTACAGCAAACAGATTCTGGTCACAGATCTTTGGT 482 Query 179671 GTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCATGGGT 179730 || | || ||||| | | || |||||| ||| ||| || |||||||||||||| Sbjct 483 GTAGCATTCTCTAATAAAAGATTCTTACACTTCCTTATGCTCTTCGTTCCTGTCATGGGA 542 Query 179731 CTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCT 179774 | ||| || || ||||| ||| | || || || ||||| || Sbjct 543 ATGTGGACATCATCAATTGGTATCGTAGGTCTTGCACTTAACCT 586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605226236424200