Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labeotropheus_20fuelleborni_20[genbank_20GCA_5F000150875.1_202008- 07-09] 58,245 sequences; 70,858,381 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq45522 185 1e-40 seq54998 176 6e-38 >seq45522 Length=1229 Score = 185 bits (204), Expect = 1e-40 Identities = 178/227 (78%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| |||| |||| ||| |||| ||||| Sbjct 521 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 468 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| || |||| | | |||||| ||| Sbjct 467 AGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGTATCGCCGCTGAGGCCTCCCGC 408 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | || |||||||||| ||| ||| | | | ||||||||||||||||||||| Sbjct 407 CTGGCCCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 348 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || | ||| ||| || ||||||| ||||||||| ||||||||||| Sbjct 347 CTCCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTGTCCGAGGGCAC 301 >seq54998 Length=1607 Score = 176 bits (194), Expect = 6e-38 Identities = 177/229 (77%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| || |||||||| | ||||| Sbjct 315 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCG---GGATCTCCTCCAA---GGCCATG 368 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||||||||||||||| |||| ||||||| |||||||| |||| Sbjct 369 AGCATCATGAACTCGTTTGTCAACGACATCTTCGAGCGCATCGCTGCCGAGGCCTCTCGC 428 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | || |||||| ||| ||| ||| | | ||||||||||||| |||||| Sbjct 429 CTGGCCCACTACAACAAACGCTCCACCATCACGTCCAGGGAGATCCAGACCGTAGTGCGC 488 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | | | ||| || ||||||| ||||||||| || |||||||||| Sbjct 489 CTGCTGCTCCCCGGTGAGCTGGCCAAGCACGCCGTGTCTGAGGGCACCA 537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7172193362695690