Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labeotropheus_20fuelleborni_20[genbank_20GCA_5F000150875.1_202008- 07-09] 58,245 sequences; 70,858,381 total letters Query= NC_027130.1 Length=172688 Score E Sequences producing significant alignments: (Bits) Value seq17522 248 1e-60 >seq17522 Length=608 Score = 248 bits (274), Expect = 1e-60 Identities = 407/588 (69%), Gaps = 29/588 (5%) Strand=Plus/Plus Query 160172 CAACTTGGGGGACTCTGGAATTTTGTGGCACTCCATGGTGCCTTCGCCCTAATTGGATTC 160231 ||||| | |||||| ||||| || || ||||| || |||| || | || || |||||| Sbjct 3 CAACTCGTGGGACTTTGGAACTTCGTTGCACTTCAGGGTGTATTTGGTCTCATCGGATTC 62 Query 160232 ATGCTCCGTCAGTTTGAACTGGCACGTCTCATCGGTATCCGTCCTTACAATGCTATTGCG 160291 ||||||||||| ||||| | ||| | || | |||||| | |||||||| || | || Sbjct 63 ATGCTCCGTCAATTTGAGATTGCAGGACTTGTAGGTATCAGACCTTACAACGCACTCGCA 122 Query 160292 TTCTCTGGTCCTATTGCTGTCTTTGTCAGCGTATTCCTCATCTACCCATTGGGTCAGTCC 160351 ||||||| | || | |||||| ||| | || || ||||| ||||| ||||| | Sbjct 123 TTCTCTGCTGTAATCTCAGTCTTTACAAGCATCTTTCTGATCTATCCATTAGGTCAACAC 182 Query 160352 AGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCT----TTAGATTCCTGTTGTT 160407 |||||||| ||||| || || ||||| || ||||||||| ||| |||| | || Sbjct 183 AGTTGGTTCTTCGCACCTTCATTTGGTGTCACAGCAATCTTCCGTTATATTC----TCTT 238 Query 160408 CCTTCAAGGATTTCACAACTGGACGCTTAACCCCTTCCATATGATGGGAGTTGCTGGTAT 160467 | | ||| ||||| || || || || || || ||||||||||| || || ||||| Sbjct 239 TATCCCAGGTTTTCATAATATAACTCTCAATCCATTTCATATGATGGGTGTAGCAGGTAT 298 Query 160468 ACTAGGAGGAGCACTGCTCAGTGCCATCCATGGCGTTACTGTAGAGAACACACTGTATGA 160527 | || |||||||| | ||| |||| || ||||| | ||||| ||||||| ||||||| Sbjct 299 ATTACGAGGAGCATTACTCTGTGCAATACATGGAGCAACTGTTCAGAACACCTTGTATGA 358 Query 160528 AGA-----------------TGG---AGA-ACAAGCAAATACCTTTAAGGCGTTTGATTC 160566 ||| || ||| ||| | | ||||| || || ||| | Sbjct 359 AGACACATCACAATACACAGAGGGTAAGATTCAATCTACAACCTTCCGTGCATTCGATCC 418 Query 160567 GACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTT 160626 ||||| |||||||| ||||| |||| | || |||||| | |||||||| |||||||| Sbjct 419 TACACAAGAAGAAGAAACTTACAGTATGATTACAGCAAACAGATTCTGGTCACAGATCTT 478 Query 160627 CGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTAT 160686 ||| | || || ||||| || | | | || || | ||| | || || ||||| || Sbjct 479 TGGTGTAGCATTCTCTAATAAAAGATTCTTACACTTCCTTATGCTCTTCGTTCCTGTCAT 538 Query 160687 GGGTCTTTGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCT 160734 ||| | |||||||| ||||| || | |||||||| || || || Sbjct 539 GGGAATGTGGACATCATCAATTGGTATCGTAGGTCTTGCACTTAACCT 586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552071364689600