Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labeotropheus_20fuelleborni_20[genbank_20GCA_5F000150875.1_202008- 07-09] 58,245 sequences; 70,858,381 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq17522 279 6e-70 >seq17522 Length=608 Score = 279 bits (308), Expect = 6e-70 Identities = 411/584 (70%), Gaps = 21/584 (4%) Strand=Plus/Plus Query 180294 CAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTT 180353 ||||| | |||||| ||||| ||||| || || || |||| || | || || ||||| Sbjct 3 CAACTCGTGGGACTTTGGAACTTCGTTGCACTTCAGGGTGTATTTGGTCTCATCGGATTC 62 Query 180354 ATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCTTACAATGCTATTGCA 180413 ||||| || || ||||| | ||| | ||| | |||||| | |||||||| || | ||| Sbjct 63 ATGCTCCGTCAATTTGAGATTGCAGGACTTGTAGGTATCAGACCTTACAACGCACTCGCA 122 Query 180414 TTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCAGTCC 180473 ||||||| | ||| | || ||| ||| | ||||| ||||| ||| | ||||| | Sbjct 123 TTCTCTGCTGTAATCTCAGTCTTTACAAGCATCTTTCTGATCTATCCATTAGGTCAACAC 182 Query 180474 AGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTTTCTT 180533 ||||||||||| || || || ||||| || |||||||||| | | | |||||| | Sbjct 183 AGTTGGTTCTTCGCACCTTCATTTGGTGTCACAGCAATCTTCCGTTATATTCTCTTTATC 242 Query 180534 CAGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTA 180593 | ||||| || || || ||||| || || ||||||||||| || || |||||| || Sbjct 243 CCAGGTTTTCATAATATAACTCTCAATCCATTTCATATGATGGGTGTAGCAGGTATATTA 302 Query 180594 GGTGGAGCATTGCTATCAGCAATCCATGGCGTAACTGTGGAGAACACACTGTATGAAGA- 180652 | |||||||| || | ||||| ||||| | |||||| ||||||| |||||||||| Sbjct 303 CGAGGAGCATTACTCTGTGCAATACATGGAGCAACTGTTCAGAACACCTTGTATGAAGAC 362 Query 180653 ----------------TGG---AGA-ACAAGCAAACACCTTTAAGGCATTTGATTCAACG 180692 || ||| ||| | | ||||| ||||| ||| | || Sbjct 363 ACATCACAATACACAGAGGGTAAGATTCAATCTACAACCTTCCGTGCATTCGATCCTACA 422 Query 180693 CAAGAGGAGGAAACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGT 180752 ||||| || ||||||||| |||| | || |||||| | |||||||| |||||||| ||| Sbjct 423 CAAGAAGAAGAAACTTACAGTATGATTACAGCAAACAGATTCTGGTCACAGATCTTTGGT 482 Query 180753 ATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGT 180812 | ||||| ||||| || | | | || || | ||| | || || ||||| ||||| Sbjct 483 GTAGCATTCTCTAATAAAAGATTCTTACACTTCCTTATGCTCTTCGTTCCTGTCATGGGA 542 Query 180813 CTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCT 180856 | |||||||| || ||||| || | |||||||| || ||||| Sbjct 543 ATGTGGACATCATCAATTGGTATCGTAGGTCTTGCACTTAACCT 586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 609885241905600