Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labeotropheus_20fuelleborni_20[genbank_20GCA_5F000150875.1_202008- 07-09] 58,245 sequences; 70,858,381 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq17522 223 4e-53 >seq17522 Length=608 Score = 223 bits (246), Expect = 4e-53 Identities = 414/609 (68%), Gaps = 33/609 (5%) Strand=Plus/Plus Query 186234 CAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGTTTC 186293 ||||| | |||||| ||||| || || || || || || | |||| |||||| || ||| Sbjct 3 CAACTCGTGGGACTTTGGAACTTCGTTGCACTTCAGGGTGTATTTGGTCTCATCGGATTC 62 Query 186294 ATGCTGCGACAGTTTGAAAT--CAGTCGTCTCGTAGGTATCCGTCCATACAATGCCATTG 186351 ||||| || || ||||| || ||| | || ||||||||| | || ||||| || | | Sbjct 63 ATGCTCCGTCAATTTGAGATTGCAG--GACTTGTAGGTATCAGACCTTACAACGCACTCG 120 Query 186352 CTTTTTCTGGTCCTATCGCTGTCTTTGTTAGTGTATTCCTCATCTACCCTCTTGGACAGT 186411 | || |||| | ||| | |||||| || | || || ||||| || | || || Sbjct 121 CATTCTCTGCTGTAATCTCAGTCTTTACAAGCATCTTTCTGATCTATCCATTAGGTCAAC 180 Query 186412 CCTCATGGTTCTTCGCTCCCTCCTTTGGAGTCGCAGCAATCT----TTAGATTCCTGTTG 186467 | ||||||||||| || || ||||| ||| ||||||||| ||| |||| | Sbjct 181 ACAGTTGGTTCTTCGCACCTTCATTTGGTGTCACAGCAATCTTCCGTTATATTC----TC 236 Query 186468 TTCCTCCAAGGATTCCACAACTGGACGTTGAATCCATTCCACATGATGGGTGTAGCAGGT 186527 || ||| ||| || || || || | |||||||| || |||||||||||||||||| Sbjct 237 TTTATCCCAGGTTTTCATAATATAACTCTCAATCCATTTCATATGATGGGTGTAGCAGGT 296 Query 186528 ATCCTTGGTGGTGCTCTGCTGTCAGCAATCCATGGTGTTACTGTAGAAAATACTCTTTAT 186587 || | | || || | || | ||||| ||||| | ||||| | || || | ||| Sbjct 297 ATATTACGAGGAGCATTACTCTGTGCAATACATGGAGCAACTGTTCAGAACACCTTGTAT 356 Query 186588 GAAGA-----------------TGGCGAA----CAAGCAAACACATTCAAAGCATTCGAT 186626 ||||| || || ||| | | || ||| ||||||||| Sbjct 357 GAAGACACATCACAATACACAGAGGGTAAGATTCAATCTACAACCTTCCGTGCATTCGAT 416 Query 186627 ACGACGCAAGAAGAAGAAACCTATTCGATGGTCACTGCGAACAGATTCTGGTCACAGATC 186686 | || |||||||||||||| || ||| | || || ||||||||||||||||||||| Sbjct 417 CCTACACAAGAAGAAGAAACTTACAGTATGATTACAGCAAACAGATTCTGGTCACAGATC 476 Query 186687 TTCGGAATTGCGTTTAGCAATAAGCGTTGGCTTCATTTCTTCATGCTCTTTGTTCCTGTT 186746 || || | || || ||||| | | | || ||| | |||||||| |||||||| Sbjct 477 TTTGGTGTAGCATTCTCTAATAAAAGATTCTTACACTTCCTTATGCTCTTCGTTCCTGTC 536 Query 186747 ATGGGTCTTTGGACCTCTTCCATTGGCATTATTGGTCTTGCTCTTAACCTTCGTGCTTAT 186806 ||||| | ||||| || || ||||| || | |||||||| |||||||| || || Sbjct 537 ATGGGAATGTGGACATCATCAATTGGTATCGTAGGTCTTGCACTTAACCTCATAGCATAC 596 Query 186807 GACTTTGTA 186815 |||||||| Sbjct 597 CACTTTGTA 605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621617493869400