Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labeotropheus_20fuelleborni_20[genbank_20GCA_5F000150875.1_202008- 07-09] 58,245 sequences; 70,858,381 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq49173 86.0 9e-12 >seq49173 Length=1384 Score = 86.0 bits (94), Expect = 9e-12 Identities = 201/298 (67%), Gaps = 14/298 (5%) Strand=Plus/Minus Query 8946 TACTCGGCCGGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATGCCGTGA---GT 9002 ||| || ||||| || || || |||||||| || || || | | | |||||||| || Sbjct 469 TACCCGTCCGGCAATCTGATTGGTGAACGACTCCACCAGGTTGCTGATGCCGTGCTCGGT 410 Query 9003 CATGAGTATGGAATTGTTGTAGACGAAGTTAACGTAGTCATACTTTGTTTTATCAATCTC 9062 || || || ||||| |||| || | |||| || | ||| | ||||| | Sbjct 409 CACGACAGAGG---TGTTGAAGACAAACTGCTTGTAGCTGTAATCTGTCTCCTCAATGTG 353 Query 9063 AAATGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATACG 9122 || ||| ||||| |||| |||||||| || | |||| ||||| || || || Sbjct 352 GAAACTATCGGGCATCAGAGGGTGCCAGTGGTAAAGGGTGTTGAACTCAGATGCAATGCG 293 Query 9123 ATTTTGGTACTGGAA-CGAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAGCTGAAAAT 9181 || ||||||||||| || | ||||||||| ||||| | |||| || | || | Sbjct 292 GTTCTGGTACTGGAAGCGCTG-GTTAAAGAGCAGCTCGGGGTCAAACTTGAGTTTGAAGT 234 Query 9182 GGTAGCCGCTGAGCTGCTGAACGTATTGC---GTCACGATAATGTTGATGGTTTCCCC 9236 | |||||||| || ||||| ||||| | | ||||| || |||||||| || || Sbjct 233 GATAGCCGCTCAGATGCTGCACGTAGTCCTCAATCACG---ATTTTGATGGTCTCACC 179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716354868884800