Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1459 140 3e-28 >seq1459 Length=39823 Score = 140 bits (154), Expect = 3e-28 Identities = 140/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 16925 TCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAAT 16984 ||||| |||||| | | | || ||||| ||||| || || ||||| ||||| || | Sbjct 12936 TCCTCAGACGGTTTGTTCTGCAGGTGTTTGAACATGAGGCAGGCGAAGTCGCAGTGCAGA 12995 Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044 ||||||||||||||||| || ||||| || || |||| ||||||||| || || ||| Sbjct 12996 CCCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCGCGCTTC 13055 Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104 || | ||| || ||||| ||||||||||| || ||||| || ||||| |||| || ||| Sbjct 13056 TTCAGCCAGAAGATCGCAGCGAACGACCCCGAGAAGAAGATCCCCTCCACGGCAGCGAAC 13115 Query 17105 GC 17106 || Sbjct 13116 GC 13117 Score = 91.5 bits (100), Expect = 2e-13 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || | |||||| ||||||||||| |||||||| |||||||||||||| ||||| Sbjct 13609 ATGTAGGTGTTGATGAGGAGGCTGTACATCTCGGAGTGGATGTTCTCCATGGCGATCTGG 13668 Query 17294 AATCCGTAAAAGCATCGGGCTTCCG 17318 || ||||| || || ||||| |||| Sbjct 13669 AACCCGTAGAAACACCGGGCCTCCG 13693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517458484136880