Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq349 118 9e-22 seq4673 107 2e-18 >seq349 Length=568042 Score = 118 bits (130), Expect = 9e-22 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| | ||||| || | || |||||||||||||| Sbjct 322013 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGTTTGCCG 321954 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || ||||||||||| ||| | ||| |||||||| ||| ||| || Sbjct 321953 GCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATTTTTGCCTTG 321894 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | || |||| |||||| || | ||| ||||||||||| || | || Sbjct 321893 ACATTCTCAATGGTGTCACTTGGCTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTC 321834 Query 21159 TTGACAAATATTTGCATTTT 21178 || ||||| || |||||||| Sbjct 321833 TTCACAAAGATCTGCATTTT 321814 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| || || || ||||| ||||| | ||||| || | || |||||||||||||| Sbjct 322241 GTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGTTTGCCG 322182 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || |||||||| || ||| | |||||||||||| |||||| || Sbjct 322181 GCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTG 322122 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | || |||| |||||| |||| ||| |||||||| || || | || Sbjct 322121 ACATTCTCAATGGTGTCACTTGGCTCCACCTCCAAGGTGATGGTCTTTCCAGTGAGGGTC 322062 Query 21159 TTGACAAATATTTGCAT 21175 || ||||| || ||||| Sbjct 322061 TTCACAAAGATCTGCAT 322045 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| | ||||| || |||| |||||||| ||||| Sbjct 323381 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCCAGCTGCTTGCCA 323322 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || |||||||| || ||| | |||||||||||| |||||| || Sbjct 323321 GCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTAGCCTTG 323262 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | || || | |||||| |||| ||| || || ||||| || | || Sbjct 323261 ACATTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATTGTTTTGCCAGTGAGGGTC 323202 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 323201 TTGACGAAGATCTGCAT 323185 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| | ||||| || | || |||||||| ||||| Sbjct 326715 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 326656 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || ||||||||||| ||| | ||| |||||||| |||||| || Sbjct 326655 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 326596 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | || || | |||||| || | ||| ||||||||||| || | || Sbjct 326595 ACATTTTCAATGGTGTCGCTTGGCTCCACCTCTAGGGTGATGGTCTTGCCAGTGAGGGTC 326536 Query 21159 TTGACAAATATTTGCATTTT 21178 || ||||| || ||||| || Sbjct 326535 TTCACAAAGATCTGCATGTT 326516 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| | ||||| || |||| |||||||| || || Sbjct 322469 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCCAGCTGCTTACCA 322410 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || |||||||| || ||| | ||| |||||||| |||||| || Sbjct 322409 GCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 322350 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | || || | |||||| || | ||| |||||||| ||||| | || Sbjct 322349 ACATTCTCAATGGTGTCGCTTGGCTCCACCTCTAGGGTGATGGTCTTACCGGTAAGGGTC 322290 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 322289 TTGACGAAGATCTGCAT 322273 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| | ||||| || | || |||||||| || || Sbjct 322925 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTACCA 322866 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| |||| || |||||||| || ||| | ||| |||||||| |||||| || Sbjct 322865 GCAAAAATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 322806 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | || || | |||||| |||| ||| || || ||||| || | || Sbjct 322805 ACATTTTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATTGTTTTGCCAGTGAGGGTC 322746 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 322745 TTGACGAAGATCTGCAT 322729 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| | ||||| || | || |||||||| || || Sbjct 322697 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTACCA 322638 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || |||||||| || ||| | ||| |||||||| |||||| || Sbjct 322637 GCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 322578 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | || || | |||||| |||| ||| || || ||||| || | || Sbjct 322577 ACATTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATTGTTTTGCCAGTGAGGGTC 322518 Query 21159 TTGACAAATATTTGCAT 21175 || ||||| || ||||| Sbjct 322517 TTCACAAAGATCTGCAT 322501 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| | ||||| || | || |||||||| || || Sbjct 323153 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTACCA 323094 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || |||||||| || ||| | ||| |||||||| |||||| || Sbjct 323093 GCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 323034 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | || || | |||||| |||| ||| || || ||||| || | || Sbjct 323033 ACATTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATTGTTTTGCCAGTGAGGGTC 322974 Query 21159 TTGACAAATATTTGCAT 21175 || ||||| || ||||| Sbjct 322973 TTCACAAAGATCTGCAT 322957 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| | ||||| || |||| |||||||| || || Sbjct 327171 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCCAGCTGCTTACCA 327112 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || |||||||| || ||| | ||| |||||||| |||||| || Sbjct 327111 GCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 327052 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | || || | |||||| || | ||| || || ||||| || | || Sbjct 327051 ACATTCTCAATGGTGTCGCTTGGCTCCACCTCTAGGGTGATTGTTTTGCCTGTGAGGGTC 326992 Query 21159 TTGACAAATATTTGCAT 21175 || ||||| || ||||| Sbjct 326991 TTCACAAAGATCTGCAT 326975 >seq4673 Length=16361 Score = 107 bits (118), Expect = 2e-18 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009 |||||| || | |||||| | || | ||||||||||| || ||||| ||||| | | Sbjct 2467 CCCCTC--AGACGGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGA 2524 Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069 |||| || | || |||||||| ||||| ||| | || || | |||||| || ||| | Sbjct 2525 GGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCGGGGGGGA 2584 Query 21070 CGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTT 21129 |||||||| || |||||| || || | | | || |||| |||||| | Sbjct 2585 TCCCTTCCTTATCCTGGATCTTGGCCTTGACATTTTCAATTGTGTCACTTGGCTCCACCT 2644 Query 21130 CCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180 ||| || |||||||| ||||||| || || ||||| || ||||| |||| Sbjct 2645 CCAAAGTGATGGTCTTCCCGGTTAGGGTCTTCACAAAGATCTGCATCTTGA 2695 Score = 102 bits (112), Expect = 7e-17 Identities = 162/231 (70%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 |||||| || | ||| | |||||| | || | ||||||||||| || ||||| ||||| Sbjct 2005 GTTTCCTCCCCTCAGACGGAGCACAAG-TGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 2063 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 | ||||| || | || |||||||| ||||| ||| | || || | |||||| || Sbjct 2064 GGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCGGG 2123 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 ||| | ||||| || || |||||| || || | | | || || | |||||| Sbjct 2124 GGGGATTCCTTCTTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTC 2183 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 | |||| ||| ||||||||||| || | || || ||||| || ||||| Sbjct 2184 CACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTAACAAAGATCTGCAT 2234 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| ||| | |||||| || || || ||||| ||||| | ||||| || | || Sbjct 2251 AGAACCAGATGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 2310 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||| ||||| || | || || | |||||| || ||| | || || || || Sbjct 2311 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCGGGGGGGATACCCTCTTTATCC 2370 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| ||||| | | | || || | ||||||| |||| ||| |||||| Sbjct 2371 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTC 2430 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || | || || ||||| || ||||| Sbjct 2431 TTGCCAGTCAGGGTCTTAACAAAGATCTGCAT 2462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422189900139656