Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq41 315 5e-81 >seq41 Length=2248030 Score = 315 bits (348), Expect = 5e-81 Identities = 607/884 (69%), Gaps = 15/884 (2%) Strand=Plus/Plus Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 || || ||| |||| ||| || || ||||||||||||||||||||| ||||||||||| Sbjct 1089944 CCCCTCAGTGAAGAGGAGAGGGATTTTCCCATTGCCTACTCGATGGTGATCCATGAGAAG 1090003 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 ||||| | ||||| || || || |||| || || | ||||||||||| |||||||| Sbjct 1090004 ATTGAGATGTTTGAGCGACTTCTAAGAGCTGTTTACACTCCTCAGAACATCTACTGTGTG 1090063 Query 107808 CACGTGGATGTGAAGTCCCC-AGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTG 107866 |||||||| ||| ||||| | ||| ||||||| |||| | |||| ||| ||||||| Sbjct 1090064 CACGTGGACCAGAAATCCCCAAAAGAATTTCAAA-AGGCTGCAGAGGCTATTGTTTCCTG 1090122 Query 107867 CTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAG 107926 ||| || ||||| | | ||||| |||| | ||| || |||||||| |||||||| Sbjct 1090123 CTTTCCTAATGTGCTTTTAGCCAGCAAGTCAGAGAGGGTAGTGTATGCCTCATGGTCCAG 1090182 Query 107927 AGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGA-GCTCAGTGCCA-TGGAAG 107984 |||||| ||||| ||||||| ||| |||| |||| ||| | || ||| |||| | Sbjct 1090183 AGTGCAGGCTGATTTGAACTGCATGAAAGATCTGCT--AGACTCACACATCCAGTGGAGG 1090240 Query 107985 TACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTG 108044 ||| | ||||| || |||||||||||||||||||| || ||||| |||||| ||| | Sbjct 1090241 TACATGCTGAACACCTGCGGGACAGACTTCCCCATCAAAACCAACAGAGAGATGATCCAG 1090300 Query 108045 GCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaa 108104 || || || | || || | ||||| |||||||||||||| | ||| ||| Sbjct 1090301 GCACTGAAAGCCATCAATGGGAGAAACAGCATGGAGTCTGAGGTCACCAGTGACAGCAAG 1090360 Query 108105 aaaaaTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAGATG 108164 || |||| |||| | | || || | ||| | | | || || || Sbjct 1090361 GCCGGCCGATGGATGTACCATCACAATGTCACCGGCACTGTTGAACGAAC---AAATGTG 1090417 Query 108165 AAGGACCCTCCCCCTGATAATTTA---CCCATGTTCACAGGGAATGCCTATTTTGTGGCC 108221 | | | ||||||| || | ||||||||||||||||| || |||||||||| | Sbjct 1090418 AGGAAAAGTCCCCCTCCTATCAGAAGCCCCATGTTCACAGGGAACGCTTATTTTGTGGTC 1090477 Query 108222 TCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGG 108281 | ||| ||||| ||||||| | | || || ||| || | || ||| Sbjct 1090478 ACAAGAGAATTTGTGAAACATGTGATGCAGGACAGAGAAGTTCAAGAGCTCATGGAGTGG 1090537 Query 108282 GTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGG 108341 | |||||||| || ||||| || |||||||| ||||| ||||| ||| | |||| Sbjct 1090538 GAGAAAGACACATACAGCCCTGATGAACACCTATGGGCAACCCTGCAGAGGATGCCGTCC 1090597 Query 108342 ATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCC 108401 | ||||| || || || | || |||||| ||| |||||||| ||| | || Sbjct 1090598 GTCCCTGGATCAGTGCCCGCCAACAGTAAGTATGACACAACAGACATGCTCGCCCTGGCT 1090657 Query 108402 AGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCC 108461 | | || |||||| || | | ||||| || || || || || || | | Sbjct 1090658 CGTGTGGTGAAGTGGGGCTATCTAGCAGGAGACGTAAGACGTGGAGCTCCGTACGAGCAT 1090717 Query 108462 TGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATT 108521 ||| ||||| | |||| ||| | || |||||||||| || ||||| | ||| | Sbjct 1090718 TGCACTGGAGAGTACAGGAGAGCCGTTTGTGTTTACGGGGCTGGAGACCTCCAGTGGCTC 1090777 Query 108522 CT-CCAGAACCATCACCTCTTGGCAAACAAGTTTGA-CCCGAGG 108563 || || ||||| || ||| | || || |||||||| || |||| Sbjct 1090778 CTAACAAAACCA-CATCTCCTTGCTAATAAGTTTGATCCTGAGG 1090820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348211643212884