Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq5694 125 2e-23 seq86 125 2e-23 >seq5694 Length=14491 Score = 125 bits (138), Expect = 2e-23 Identities = 385/592 (65%), Gaps = 5/592 (1%) Strand=Plus/Minus Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | ||||| | ||||| || |||||| || || || || || ||| | || || Sbjct 993 TACAACTTCTTCGGCTTCAAGACTCTGGAGCGCTCCTACCTGCTGAAGATTAACGGAAAA 934 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 | | || || ||||||||| ||||| |||| ||||||| || ||||| ||| Sbjct 933 GTGGCTGAGAGACCACAGCACATGCTGATGAGAGTTTCTGTCGGAATCCACAAATCCGAC 874 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997 ||||| | ||||||| |||| | || ||| ||| | ||||| ||| || Sbjct 873 ATAGATGCAGCCATCGAGACCTACAACCTGCTGTCTGAGAAGTGGTTCACACACGCCTCA 814 Query 248998 CCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCC 249057 || || |||||||| || || ||| || |||||| | ||||| || || ||| Sbjct 813 CCTACCCTCTTCAATGCAGGAACCAACAGGCCACAGCTGTCCAGCTGCTTCCTGCTAGCC 754 Query 249058 ATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACGGCGAAGATTTCT 249117 ||| |||||||| | || |||||||||||||| || || ||| || || || Sbjct 753 ATGAAAGACGACAGCATTGAAGGCATTTATGACACTCTGAAGCAGTGCGCCCTCATCTCC 694 Query 249118 AAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGA-AGGGTTCGTACAT 249176 |||| || || |||||||| | | ||| | || || ||| |||| | ||||| Sbjct 693 AAATCAGCTGGAGGAATCGGCGTAGCAGTCAGCTGTATTAGATCGACAGGGAGC-TACAT 635 Query 249177 CAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCAC 249236 || |||||||| | | ||| | || ||| | || || | | ||| Sbjct 634 TGCCGGCACAAATGGCAACTCAAACGGTCTTGTCCCCATGCTGAGAGTGTACAACAACAC 575 Query 249237 CGCCAGGTTCATCAACCAGGCCGGGCGCCGAAAG---GGGTCGTTCGCCATGTATTTGGA 249293 || | | || |||||| || | || | || | ||||||||||| | || Sbjct 574 GGCGCGTTATGTCGACCAGGGTGGAAACAAAAGGCCCGGAGCCTTCGCCATGTACCTTGA 515 Query 249294 AGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCT 249353 |||||| ||| | || || ||| |||| |||| ||||||| || || ||| Sbjct 514 GCCCTGGCACTTTGATGTGTTTGACTTCTTGGAGCTGAAGAAGAACACAGGAAAGGAGGA 455 Query 249354 CATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATG 249405 |||||| | ||||||||||||| | ||||| || ||||| |||||||| Sbjct 454 GCAGAGAGCCAGAGACCTCTTCTACGCCATGTGGATCCCCGACCTGTTCATG 403 >seq86 Length=1688118 Score = 125 bits (138), Expect = 2e-23 Identities = 385/592 (65%), Gaps = 5/592 (1%) Strand=Plus/Plus Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | ||||| | ||||| || |||||| || || || || || ||| | || || Sbjct 229101 TACAACTTCTTCGGCTTCAAGACCCTGGAGCGCTCCTACCTGCTGAAGATTAACGGAAAA 229160 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 | | || || ||||||||| ||||| |||| ||||||| || ||||| ||| Sbjct 229161 GTGGCTGAGAGACCACAGCACATGCTGATGAGAGTTTCTGTCGGAATCCACAAATCCGAC 229220 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997 ||||| | ||||||| |||| | || ||| ||| | ||||| ||| || Sbjct 229221 ATAGATGCAGCCATCGAGACCTACAACCTGCTGTCTGAGAAGTGGTTCACACACGCCTCA 229280 Query 248998 CCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCC 249057 || || |||||||| || || ||| || |||||| | ||||| || || ||| Sbjct 229281 CCTACCCTCTTCAATGCAGGAACCAACAGGCCACAGCTGTCCAGCTGCTTCCTGCTAGCC 229340 Query 249058 ATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACGGCGAAGATTTCT 249117 ||| |||||||| | || |||||||||||||| || || ||| || || || Sbjct 229341 ATGAAAGACGACAGCATTGAAGGCATTTATGACACTCTGAAGCAGTGCGCCCTCATCTCC 229400 Query 249118 AAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGA-AGGGTTCGTACAT 249176 |||| || || |||||||| | | ||| | || || ||| |||| | ||||| Sbjct 229401 AAATCAGCTGGAGGAATCGGCGTAGCAGTCAGCTGTATTAGATCGACAGGGAGC-TACAT 229459 Query 249177 CAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCAC 249236 || |||||||| | | ||| | || ||| | || || | | ||| Sbjct 229460 TGCCGGCACAAATGGCAACTCAAACGGTCTTGTCCCCATGCTGAGAGTGTACAACAACAC 229519 Query 249237 CGCCAGGTTCATCAACCAGGCCGGGCGCCGAAAG---GGGTCGTTCGCCATGTATTTGGA 249293 || | | || |||||| || | || | || | ||||||||||| | || Sbjct 229520 GGCGCGTTATGTCGACCAGGGTGGAAACAAAAGGCCCGGAGCCTTCGCCATGTACCTTGA 229579 Query 249294 AGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCT 249353 |||||| ||| | || || ||| |||| |||| ||||||| || || ||| Sbjct 229580 GCCCTGGCACTTTGATGTGTTTGACTTCTTGGAGCTGAAGAAGAACACAGGAAAGGAGGA 229639 Query 249354 CATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATG 249405 |||||| | ||||||||||||| | ||||| || ||||| |||||||| Sbjct 229640 GCAGAGAGCCAGAGACCTCTTCTACGCCATGTGGATCCCCGACCTGTTCATG 229691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073581139727488