Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq349 131 1e-25 seq4673 111 1e-19 >seq349 Length=568042 Score = 131 bits (144), Expect = 1e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||| |||||||||||| || ||| | || ||||| || Sbjct 322020 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTG 321961 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 ||| ||||| || |||| || ||| ||||| || || | |||||||||||| ||||| Sbjct 321960 TTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATTTT 321901 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 | ||| || | | | | |||| | ||||||||| | ||| || |||||||| || Sbjct 321900 TGCCTTGACATTCTCAATGGTGTCACTTGGCTCCACCTCAAGGGTGATGGTCTTGCCAGT 321841 Query 45313 CAGAGTCTTCACAAAGATTTGCATGTT 45339 || |||||||||||||| ||||| || Sbjct 321840 GAGGGTCTTCACAAAGATCTGCATTTT 321814 Score = 116 bits (128), Expect = 3e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||| |||||||||||| || ||| | || ||||| || Sbjct 326722 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTG 326663 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || |||| || ||| ||||| || || | |||||||||||| || || Sbjct 326662 CTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTT 326603 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | ||||||||| | ||| || |||||||| || Sbjct 326602 GGCCTTGACATTTTCAATGGTGTCGCTTGGCTCCACCTCTAGGGTGATGGTCTTGCCAGT 326543 Query 45313 CAGAGTCTTCACAAAGATTTGCATGTT 45339 || |||||||||||||| |||||||| Sbjct 326542 GAGGGTCTTCACAAAGATCTGCATGTT 326516 Score = 109 bits (120), Expect = 4e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||| |||||||||||| || ||| | || ||||| || Sbjct 322704 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTG 322645 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || |||| || ||| || || || || | |||||||||||| || || Sbjct 322644 CTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTT 322585 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | | |||| | ||||||||||| ||| || || ||||| || Sbjct 322584 GGCCTTGACATTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATTGTTTTGCCAGT 322525 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || |||||||||||||| |||||| Sbjct 322524 GAGGGTCTTCACAAAGATCTGCATG 322500 Score = 109 bits (120), Expect = 4e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||| |||||||||||| || ||| | || ||||| || Sbjct 323160 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTG 323101 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || |||| || ||| || || || || | |||||||||||| || || Sbjct 323100 CTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTT 323041 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | | |||| | ||||||||||| ||| || || ||||| || Sbjct 323040 GGCCTTGACATTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATTGTTTTGCCAGT 322981 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || |||||||||||||| |||||| Sbjct 322980 GAGGGTCTTCACAAAGATCTGCATG 322956 Score = 109 bits (120), Expect = 4e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||| |||||||||||| || ||| |||| ||||| || Sbjct 327178 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCCAGCTG 327119 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || |||| || ||| || || || || | |||||||||||| || || Sbjct 327118 CTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTT 327059 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | | |||| | ||||||||| | ||| || || ||||| || Sbjct 327058 GGCCTTGACATTCTCAATGGTGTCGCTTGGCTCCACCTCTAGGGTGATTGTTTTGCCTGT 326999 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || |||||||||||||| |||||| Sbjct 326998 GAGGGTCTTCACAAAGATCTGCATG 326974 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| || ||||| |||||||||||| || ||| | || ||||| || Sbjct 322248 GTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTG 322189 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 ||| ||||| || |||| || ||| || || || || | || ||||||||| || || Sbjct 322188 TTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTT 322129 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | | |||| | ||||||||||| ||| || ||||| || || Sbjct 322128 GGCCTTGACATTCTCAATGGTGTCACTTGGCTCCACCTCCAAGGTGATGGTCTTTCCAGT 322069 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || |||||||||||||| |||||| Sbjct 322068 GAGGGTCTTCACAAAGATCTGCATG 322044 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||| |||||||||||| || ||| |||| ||||| || Sbjct 322476 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCCAGCTG 322417 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || |||| || ||| || || || || | |||||||||||| || || Sbjct 322416 CTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTT 322357 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | | |||| | ||||||||| | ||| || ||||| || || Sbjct 322356 GGCCTTGACATTCTCAATGGTGTCGCTTGGCTCCACCTCTAGGGTGATGGTCTTACCGGT 322297 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || ||||| |||||| Sbjct 322296 AAGGGTCTTGACGAAGATCTGCATG 322272 Score = 98.7 bits (108), Expect = 8e-16 Identities = 148/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| ||||||||| |||||||||||| || ||| |||| |||| Sbjct 323392 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCCA 323333 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | || || || || || |||| || ||| || || || || | || ||||||||| | Sbjct 323332 GCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGA 323273 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | | | |||| | ||||||||||| ||| || || |||| Sbjct 323272 TCTTAGCCTTGACATTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATTGTTTTGC 323213 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATG 45337 | || || ||||| || ||||| |||||| Sbjct 323212 CAGTGAGGGTCTTGACGAAGATCTGCATG 323184 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||| |||||||||||| || ||| | || ||||| || Sbjct 322932 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTG 322873 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || |||| || ||| || || || || | |||||||||||| || || Sbjct 322872 CTTACCAGCAAAAATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTT 322813 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | ||||||||||| ||| || || ||||| || Sbjct 322812 GGCCTTGACATTTTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATTGTTTTGCCAGT 322753 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || ||||| |||||| Sbjct 322752 GAGGGTCTTGACGAAGATCTGCATG 322728 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| || ||||| |||||||||||| || ||| | || ||||| || Sbjct 326950 GTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTG 326891 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || |||| || ||| || || || || | |||||||||||| || || Sbjct 326890 CTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTT 326831 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | | |||| | |||||| |||| ||| || ||||| || || Sbjct 326830 GGCCTTGACGTTCTCAATGGTGTCACTTGGCTCCACTTCCAGGGTGATGGTCTTACCAGT 326771 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || ||||| |||||| Sbjct 326770 GAGGGTCTTGACGAAGATCTGCATG 326746 >seq4673 Length=16361 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| || || ||| || ||||| |||||||||||| || ||| | || ||| Sbjct 2254 ACCAGATGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCC 2313 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| ||||| || ||||| || | |||||| || ||| Sbjct 2314 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCGGGGGGGATACCCTCTTTATCCTGG 2373 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | |||| | ||||||||||| ||| || |||||| Sbjct 2374 ATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTG 2433 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| ||||| |||||||| ||||| Sbjct 2434 CCAGTCAGGGTCTTAACAAAGATCTGCAT 2462 Score = 109 bits (120), Expect = 4e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 45130 CAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAG 45189 |||||| || ||| ||||||||| |||||||||||| || ||| | || ||||| Sbjct 2028 CAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAG 2087 Query 45190 TTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAAT 45249 || || || || || |||| ||||| || ||||| || | || || || ||| || Sbjct 2088 CTGCTTGCCAGCAAAGATCAGACGCTGCTGATCGGGGGGGATTCCTTCTTTATCCTGGAT 2147 Query 45250 TTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCC 45309 || ||| || | | | | |||| | ||||||||||| ||| || |||||||| Sbjct 2148 CTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCC 2207 Query 45310 CGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||||| ||||| |||||||| |||||| Sbjct 2208 AGTCAGGGTCTTAACAAAGATCTGCATG 2235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395010361492786