Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq349 102 6e-17 seq4673 86.0 5e-12 >seq349 Length=568042 Score = 102 bits (112), Expect = 6e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| || | || || | ||| || || || || || || ||||||||||||| Sbjct 322043 CCTCCCCTCAGACGCAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 321984 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | |||||||| |||||||| ||| |||| || || || || || ||| Sbjct 321983 AGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGG 321924 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||| ||||| || |||| | |||||| | ||| ||||||| ||||| Sbjct 321923 ATGCCCTCCTTGTCCTGGATTTTTGCCTTGACATTCTCAATGGTGTCACTTGGCTCCACC 321864 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTT 18329 |||| ||||||| | ||||| || | || || ||||| || ||||||||| Sbjct 321863 TCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATTTTT 321813 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| || | || || | ||| || || |||||||| || ||||||||||||| Sbjct 322271 CCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAG 322212 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | |||||||| |||||||| ||| |||| || || || ||||| ||| Sbjct 322211 AGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGA 322152 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||||||| || || | |||||| | ||| ||||||| ||||| Sbjct 322151 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTTGGCTCCACC 322092 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||||||| | || || || | || || ||||| || ||||| Sbjct 322091 TCCAAGGTGATGGTCTTTCCAGTGAGGGTCTTCACAAAGATCTGCAT 322045 >seq4673 Length=16361 Score = 86.0 bits (94), Expect = 5e-12 Identities = 166/244 (68%), Gaps = 1/244 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| || | || || | ||| || || || || || || ||||||||||||| Sbjct 2464 CCTCCCCTCAGACGGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 2523 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | |||||||| || ||||| ||| |||| || | || ||||| ||| Sbjct 2524 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCGGGGGGG 2583 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||||||||| || | |||||| | | ||| ||||||| ||||| Sbjct 2584 ATCCCTTCCTTATCCTGGATCTTGGCCTTGACATTTTCAATTGTGTCACTTGGCTCCACC 2643 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAAACTCTTA 18338 || | |||||| | || ||||| | || || ||||| || ||||| || | ||| ||| Sbjct 2644 TCCAAAGTGATGGTCTTCCCGGTTAGGGTCTTCACAAAGATCTGCATCTTGACACT-TTA 2702 Query 18339 TAAA 18342 ||| Sbjct 2703 AAAA 2706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379281743248170