Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq4673 111 2e-19 seq349 102 8e-17 >seq4673 Length=16361 Score = 111 bits (122), Expect = 2e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 139559 AAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGC 139618 ||||| | || ||||| || || ||||| || ||| | |||| ||||| ||| Sbjct 2029 AAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGC 2088 Query 139619 TGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATT 139678 || || |||||| |||||||||| ||||||||||| || || |||||||| || ||| Sbjct 2089 TGCTTGCCAGCAAAGATCAGACGCTGCTGATCGGGGGGGATTCCTTCTTTATCCTGGATC 2148 Query 139679 TTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCG 139738 || || | | || | |||||| ||||||||||||| | ||| | |||||||| Sbjct 2149 TTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCA 2208 Query 139739 GTCAACGTTTTTACGAATATTTGCAT 139764 |||| || || || || || ||||| Sbjct 2209 GTCAGGGTCTTAACAAAGATCTGCAT 2234 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || || ||||| || ||||| || ||| | |||| ||||| ||||| || || Sbjct 2266 GTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 2325 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||||||||| ||||||||||| || || || ||||| || ||| || || Sbjct 2326 GCGAAGATCAGACGCTGCTGATCGGGGGGGATACCCTCTTTATCCTGGATCTTGGCCTTC 2385 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | |||||| ||||||||||||| | ||| | |||||||| |||| || Sbjct 2386 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTC 2445 Query 139748 TTTACGAATATTTGCATAGCT 139768 || || || || |||||| || Sbjct 2446 TTAACAAAGATCTGCATACCT 2466 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || ||| | |||| ||||| ||||| || ||| Sbjct 2494 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 2553 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||||||||| ||||||||||| || || ||||| || || ||| || || Sbjct 2554 GCAAAGATCAGACGCTGCTGATCGGGGGGGATCCCTTCCTTATCCTGGATCTTGGCCTTG 2613 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | ||| | |||||| | ||||||||||| | || | ||||| ||||| | || Sbjct 2614 ACATTTTCAATTGTGTCACTTGGCTCCACCTCCAAAGTGATGGTCTTCCCGGTTAGGGTC 2673 Query 139748 TTTACGAATATTTGCAT 139764 || || || || ||||| Sbjct 2674 TTCACAAAGATCTGCAT 2690 >seq349 Length=568042 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608 ||||| || | ||| | || ||||| || || ||||| || ||| | |||| Sbjct 322488 ACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 322429 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 |||||| ||||| ||||||||| ||||||| | |||||||| || || ||||| || || Sbjct 322428 GTCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTT 322369 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || || | | || | |||||| | ||||||||||| | ||| | Sbjct 322368 GTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCCACCTCTAGGGTGAT 322309 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| ||||| | || || ||||| || ||||| Sbjct 322308 GGTCTTACCGGTAAGGGTCTTGACGAAGATCTGCAT 322273 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608 ||||| ||| | ||| | || ||||| || || ||||| || ||| | |||| Sbjct 322032 ACGCAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 321973 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||||| |||||||| || ||| ||||||| | ||||| || || || ||||| || || Sbjct 321972 ATCTTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTT 321913 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||||||| || | | || | ||||| | ||||||||||||| ||| | Sbjct 321912 GTCCTGGATTTTTGCCTTGACATTCTCAATGGTGTCACTTGGCTCCACCTCAAGGGTGAT 321853 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||| || | || || || || || ||||| Sbjct 321852 GGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 321817 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || ||| | |||| |||||| ||||| || ||| Sbjct 323381 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCCAGCTGCTTGCCA 323322 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| ||||||| | |||||||| || || |||||||| ||||| ||| || || Sbjct 323321 GCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTAGCCTTG 323262 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | |||||| | ||||||||||| | ||| | || ||||| || | || Sbjct 323261 ACATTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATTGTTTTGCCAGTGAGGGTC 323202 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 323201 TTGACGAAGATCTGCAT 323185 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608 ||||| || | ||| | || ||||| || || ||||| || ||| | |||| Sbjct 322944 ACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 322885 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||||| ||||| ||||||||| | ||||| | |||||||| || || ||||| || || Sbjct 322884 ATCTTCCAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTT 322825 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || || | | ||| | |||||| | ||||||||||| | ||| | Sbjct 322824 GTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGAT 322765 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || ||||| || | || || ||||| || ||||| Sbjct 322764 TGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 322729 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608 ||||| || | ||| | || ||||| || || ||||| || ||| | |||| Sbjct 327190 ACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 327131 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 |||||| ||||| ||||||||| ||||||| | |||||||| || || ||||| || || Sbjct 327130 GTCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTT 327071 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || || | | || | |||||| | ||||||||||| | ||| | Sbjct 327070 GTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCCACCTCTAGGGTGAT 327011 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || ||||| || | || || || || || ||||| Sbjct 327010 TGTTTTGCCTGTGAGGGTCTTCACAAAGATCTGCAT 326975 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608 ||||| || | ||| | || ||||| || || ||||| || ||| | |||| Sbjct 322716 ACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 322657 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||||| ||||| ||||||||| ||||||| | |||||||| || || ||||| || || Sbjct 322656 ATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTT 322597 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || || | | || | |||||| | ||||||||||| | ||| | Sbjct 322596 GTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGAT 322537 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || ||||| || | || || || || || ||||| Sbjct 322536 TGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 322501 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608 ||||| || | ||| | || ||||| || || ||||| || ||| | |||| Sbjct 323172 ACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 323113 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||||| ||||| ||||||||| ||||||| | |||||||| || || ||||| || || Sbjct 323112 ATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCCTCCTT 323053 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || || | | || | |||||| | ||||||||||| | ||| | Sbjct 323052 GTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGAT 322993 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || ||||| || | || || || || || ||||| Sbjct 322992 TGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 322957 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608 ||||| ||| | ||| | || ||||| || || ||||| || ||| | |||| Sbjct 326734 ACGCAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 326675 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||||| ||||| || || ||| ||||||| | ||||| || || || ||||| || || Sbjct 326674 ATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTT 326615 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || || | | ||| | |||||| | ||||||||||| | ||| | Sbjct 326614 GTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTTGGCTCCACCTCTAGGGTGAT 326555 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||| || | || || || || || ||||| Sbjct 326554 GGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 326519 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608 ||||| || | ||| | || || ||||| || ||||| || ||| | |||| Sbjct 322260 ACGCAGGACAAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 322201 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||||| |||||||| || ||| ||||||| | |||||||| || || |||||||| || Sbjct 322200 ATCTTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTT 322141 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 ||| ||| || || | | || | ||||| | ||||||||||| | ||| | Sbjct 322140 GTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTTGGCTCCACCTCCAAGGTGAT 322081 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| || || | || || || || || ||||| Sbjct 322080 GGTCTTTCCAGTGAGGGTCTTCACAAAGATCTGCAT 322045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495980500027200