Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1459 107 3e-18 seq72 84.2 3e-11 >seq1459 Length=39823 Score = 107 bits (118), Expect = 3e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489 ||||| ||||| ||||| ||||| |||||||| ||||| || || || ||||| ||| Sbjct 13120 GTGGCGTTCGCTGCCGTGGAGGGGATCTTCTTCTCGGGGTCGTTCGCTGCGATCTTCTGG 13061 Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549 || ||||||||||| || |||||||| ||||| | |||||| | || ||||| Sbjct 13060 CTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTGATCAGCAGAGAC 13001 Query 125550 GAGGGCCTACACTGTGACTTTGCC 125573 ||||| || ||||| ||||| ||| Sbjct 13000 GAGGGTCTGCACTGCGACTTCGCC 12977 >seq72 Length=1853568 Score = 84.2 bits (92), Expect = 3e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 125425 GACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCT 125484 |||| ||||| ||||| || || |||||||||||||| || || || || ||||||| Sbjct 1652291 GACTTGTGGCTTTCGCAGCAGTGGAGGGCATCTTCTTCTCTGGCTCATTCGCTGCCATCT 1652232 Query 125485 TTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540 |||||| |||||| | ||||| ||||| || || || || |||||| | ||| Sbjct 1652231 ATTGGCTGAAGAAGAGAGGACTAATGCCAGGTCTTACCTACTCCAACGAGCTGATA 1652176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740934461210160