Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq285 114 9e-21 >seq285 Length=713875 Score = 114 bits (126), Expect = 9e-21 Identities = 126/168 (75%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||||| ||||||||||| || || | |||||||||||| || ||||| || || ||||| Sbjct 56651 CATGTTTGTGTACTCTGCACCAAAGTGCCTCCACTGGAATCCATACACAGGACCGAGGTC 56710 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 || || ||||| | || || || || | ||||| | ||| || ||||| || Sbjct 56711 GCCCTCCTCCCTCTCTGTGAACCCGAGGTTGTCGAGGAAGTCCCGGGAGCCGTTGGCATC 56770 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 ||| ||||| ||||| ||||| |||||||| |||| ||| || ||||| Sbjct 56771 CCAAATCTTCACCCCTTTCTCCGAGAGCTCCTTGGCGTTCGTCGACCC 56818 Score = 104 bits (114), Expect = 2e-17 Identities = 121/162 (75%), Gaps = 1/162 (1%) Strand=Plus/Plus Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550 ||||| || | || || |||||||| || || || ||||||||||| ||| || || Sbjct 56041 AGCCCTGTGATGTGTGCGATCATGTAGGTAAGAAGCGCGTAGCTGGCGACGTTGAAAGGC 56100 Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610 || |||| ||||||| | ||||| | |||||| ||||| || || ||||| |||| | Sbjct 56101 ACGCCGAGGCCCATGT-CACCCGAGCGCTGGTACAGCTGGCAGGACAGCTCGCCGTCACA 56159 Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTAT 25652 |||||| |||||||| | || || ||| || || || || || Sbjct 56160 CACGTAGAACTGACAGAGGGCGTGGCAGGGGGGCAGCGCCAT 56201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340081777680018