Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq624 95.1 6e-15 seq204 91.5 8e-14 seq6750 86.0 3e-12 seq3713 86.0 3e-12 seq2555 86.0 3e-12 seq207 86.0 3e-12 seq863 82.4 4e-11 seq762 82.4 4e-11 seq437 82.4 4e-11 seq347 82.4 4e-11 seq205 82.4 4e-11 seq33 82.4 4e-11 >seq624 Length=225665 Score = 95.1 bits (104), Expect = 6e-15 Identities = 83/103 (81%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 11428 GAAATATAGAATTAATAAAAAATCAAA-TTGGCCCATGAAAGGATCGAACCTTCGACCTT 11486 ||| || ||||| || |||||||| ||||||| | |||||||||| ||||||| Sbjct 47528 GAATTAAAGAATAAAGAAAAAATCGTGGTTGGCCCGTACGGGGATCGAACCCGCGACCTT 47469 Query 11487 CGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||| ||||||| |||||||||||||| |||| Sbjct 47468 GGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGGCC 47426 >seq204 Length=982069 Score = 91.5 bits (100), Expect = 8e-14 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 |||| | ||||||||| | |||||||||| ||||||| ||||||||||||| |||| Sbjct 442392 AAAAGCCAATTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGC 442451 Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529 ||| |||||||||||||| |||| Sbjct 442452 TCTAACCAACTGAGCTAACCGGCC 442475 Score = 89.7 bits (98), Expect = 3e-13 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 || ||||| | | ||||||| | |||||||||| ||||||| ||||||||||||| Sbjct 439845 ATCAAAAAGCTAGTTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACC 439904 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| |||||||||||||| |||| Sbjct 439905 ACGCTCTAACCAACTGAGCTAACCGGCC 439932 Score = 86.0 bits (94), Expect = 3e-12 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513 |||||||| | |||||||||| ||||||| ||||||||||||| ||||||| |||| Sbjct 439625 ATTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCA 439684 Query 11514 ACTGAGCTAATGGGCC 11529 |||||||||| |||| Sbjct 439685 ACTGAGCTAACCGGCC 439700 >seq6750 Length=12863 Score = 86.0 bits (94), Expect = 3e-12 Identities = 69/82 (84%), Gaps = 3/82 (4%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 5759 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 5818 Query 11528 CC--GTCGACGATTGTGATTTT 11547 || || ||| | |||||||| Sbjct 5819 CCATGTTTACG-TCGTGATTTT 5839 >seq3713 Length=18551 Score = 86.0 bits (94), Expect = 3e-12 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||| | | | ||||||| | |||||||||| ||||||| ||||||||||||| || Sbjct 6555 AAAACAACTAGTTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCAC 6496 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||| |||| Sbjct 6495 GCTCTAACCAACTGAGCTAACCGGCC 6470 >seq2555 Length=23130 Score = 86.0 bits (94), Expect = 3e-12 Identities = 69/82 (84%), Gaps = 3/82 (4%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 1311 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 1370 Query 11528 CC--GTCGACGATTGTGATTTT 11547 || || ||| | |||||||| Sbjct 1371 CCATGTTTACG-TCGTGATTTT 1391 >seq207 Length=964833 Score = 86.0 bits (94), Expect = 3e-12 Identities = 69/82 (84%), Gaps = 3/82 (4%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 719081 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 719022 Query 11528 CC--GTCGACGATTGTGATTTT 11547 || || ||| | |||||||| Sbjct 719021 CCATGTTTACG-TCGTGATTTT 719001 >seq863 Length=117637 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 28075 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 28134 Query 11528 CC 11529 || Sbjct 28135 CC 28136 >seq762 Length=150000 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 6363 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 6304 Query 11528 CC 11529 || Sbjct 6303 CC 6302 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 7339 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 7280 Query 11528 CC 11529 || Sbjct 7279 CC 7278 >seq437 Length=412664 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 344970 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 345029 Query 11528 CC 11529 || Sbjct 345030 CC 345031 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 348720 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 348779 Query 11528 CC 11529 || Sbjct 348780 CC 348781 >seq347 Length=569485 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 17215 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 17274 Query 11528 CC 11529 || Sbjct 17275 CC 17276 >seq205 Length=970666 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 580346 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 580405 Query 11528 CC 11529 || Sbjct 580406 CC 580407 >seq33 Length=2353111 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 2077573 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 2077514 Query 11528 CC 11529 || Sbjct 2077513 CC 2077512 Lambda K H 0.638 0.409 0.919 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261448284881416