Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq14 102 1e-16 seq209 96.9 5e-15 seq490 87.8 3e-12 >seq14 Length=2926375 Score = 102 bits (112), Expect = 1e-16 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 9610 TCCCCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGT 9669 || ||||| | ||||| || | ||||||||| || ||||| ||| | || || Sbjct 958653 TCACCGATCAGAATGAGCCGTGCGGTCTGAAAGAGCCTCTCGTCGTCCCAGTAAGGGTGG 958594 Query 9670 TCTCGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATC 9729 | |||| ||||| ||||| | ||||||||| | |||||||| || ||||||||| Sbjct 958593 ACCTCCTTCAACACATCACACACCCGGTTGTGTTCACGTAGCCAGATGGTGGCGTACATC 958534 Query 9730 ATGAGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGC 9770 || ||||| || |||||||| |||||||| || || ||||| Sbjct 958533 ATCAGACCGGGGACCAGGCCGAAAGCCTCGTGGCCCACAGC 958493 >seq209 Length=958208 Score = 96.9 bits (106), Expect = 5e-15 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 8762 TCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTCGCCATGAGG 8821 ||||| || |||||||||| |||||||| | ||||||||||| || |||| ||| Sbjct 643271 TCTCCTCCAAAGGTGCTGGACTTCCAGTACTCAGGGGAGCAGATTGGATTTCCCATCAGG 643212 Query 8822 CCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATGGCGTTGGGA 8881 || || | || || ||||| |||| ||| | || |||||||| || ||| ||| | | Sbjct 643211 CCCTTCAAAGAGAAGGGAGCACCCATCTCTACCATACTCTCACCAAATATGCCGTCAGAA 643152 Query 8882 CGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCTCCGTA 8937 || | || |||| | || || ||||| | ||| | ||| || ||||| ||||| Sbjct 643151 CGAGTTTTCTCCAATAGGACGCCAGTGTAAAGCTCTAAAGCATCTATGTCACCGTA 643096 Score = 95.1 bits (104), Expect = 2e-14 Identities = 174/249 (70%), Gaps = 16/249 (6%) Strand=Plus/Minus Query 9610 TCCCCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGT 9669 || || || |||||||||| |||||||| || || || || ||| ||| ||||| Sbjct 639945 TCACCAATGATGATGAGTCTGGTGGTCTGGAAGAGCTGCTCATCATCCCAGGTGGGATGC 639886 Query 9670 TCTCGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATC 9729 ||| ||||| | || || |||||||| || || | ||||| | ||||||||||| Sbjct 639885 TCTGTCTTCAGGATGTCACAGACTCTGTTATGCTCTC--AGCCATACTGTAGCGTACATG 639828 Query 9730 ATGAGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGG- 9788 |||| || |||| | |||||| |||| ||||| | || |||||| | || || Sbjct 639827 GTGAGGCCTGGCAGGATGCCAAACACCTCCTGACCAATGGCAAGACGC---TGCTCAGGA 639771 Query 9789 ----CA-CTTCGGGAGGATAGATCATGTGCACCTGGACATCTTTGAC-CGAGGGGGGATA 9842 || |||| |||||| | ||||||||| |||| || ||| | ||| ||| || Sbjct 639770 GTGACAGCTTC---AGGATACACCATGTGCACAGGGACCTCAGAGACTCTAGGAGGG-TA 639715 Query 9843 CATTTCACC 9851 ||| ||||| Sbjct 639714 CATCTCACC 639706 >seq490 Length=353978 Score = 87.8 bits (96), Expect = 3e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 8753 AACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTC 8812 |||||||| | || || ||||||||||| |||||||| | || || || ||| ||| Sbjct 135722 AACCCCACTTTACCTCCAAAGGTGCTGGGCTTCCAGTATTCAGGAGAACATATGGGGTTT 135781 Query 8813 GCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATG 8872 ||| ||||||||| || || || || || |||| ||| | ||||||||||| || ||| Sbjct 135782 CCCAGGAGGCCTTTAAGAGAGAAAGGGGCACCCATCTCCACCATGCTCTCACCAAATATG 135841 Query 8873 G 8873 | Sbjct 135842 G 135842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708405537563040