Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq86 140 8e-28 seq5694 134 4e-26 >seq86 Length=1688118 Score = 140 bits (154), Expect = 8e-28 Identities = 608/949 (64%), Gaps = 21/949 (2%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| |||||| | || || | | |||||| ||||| | |||||| |||| Sbjct 229266 TTCACACACGCCTCACCTACCCTCTTCAATGCAGGAACCAACAGGCCACAGCTGTCCAGC 229325 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || ||| ||||| ||||| ||| || || || | |||||| || ||| | Sbjct 229326 TGCTTCCTGCTAGCCATGAAAGACGACAGCATTGAAGGCATTTATGACACTCTGAAGCAG 229385 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC- 363725 || || || || ||||| || || ||||| || ||| | || | | || | | Sbjct 229386 TGCGCCCTCATCTCCAAATCAGCTGGAGGAATCGGCGTAGCAGTCAGCTGTATTAGATCG 229445 Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785 |||| || |||||| ||||||| || |||| || || || || |||||||| | Sbjct 229446 ACAGGG-AGCTACATTGCCGGCACAAATGGCAACTCAAACGGTCTTGTCCCCATGCTGAG 229504 Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845 |||| |||| || ||| | || ||||||||||||||| || | || || || Sbjct 229505 AGTGTACAACAACACGGCGCGTTATGTCGACCAGGGTGGAAACAAAAGGCCCGGAGCCTT 229564 Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA 363905 || ||||| || ||||| || ||| | ||||| || | ||||| ||| || Sbjct 229565 CGCCATGTACCTTGAGCCCTGGCACTTTGATGTGTTTGACTTCTTGGAGCTGAAGAAGAA 229624 Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965 ||| ||||| ||||| | | || | || || ||||| || | ||| | | |||| Sbjct 229625 CACAGGAAAGGAGGAGCAGAGAGCCAGAGACCTCTTCTACGCCATGTGGATCCCCGACCT 229684 Query 363966 TTTTATGAAGCGCGTGGAG-GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTC 364024 || ||||| | || ||| ||| || | ||||| || | || || | || || | Sbjct 229685 GTTCATGAAAAGAGTAGAGAGCA-ACCAGGACTGGTCTCTGATGTGTCCTAATGAGTGCC 229743 Query 364025 CAGGTCTTTCCGATGTATGGGGTGACGACTAT--GTTGCTCTATACGAAAAGTATGAATC 364082 | || || || ||||| || || | | | ||| || || | ||||| Sbjct 229744 CTGGGCTGGATGAGTGCTGGGGGGAGGAGTTTGAGAAGCTTTACACCTCA--TATGAGAA 229801 Query 364083 GGAGGGAAAGG---CTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGA 364139 |||||| | || ||| | | || ||| || | ||| || ||||| || Sbjct 229802 GGAGGGGAGGGTGAAGCGTGTG---GTGAAAGCTCAGCAGGTGTGGCACGCAATCATCGA 229858 Query 364140 TTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTC 364199 || |||| || ||||| || || || ||| | || ||||| | |||||| | ||| | Sbjct 229859 GTCCCAGACAGAAACAGGTACTCCATACATGCTTTATAAAGACGCCTGCAACAGAAAGAC 229918 Query 364200 CAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATA 364259 |||||| ||| | || || || || || |||||||| || || || || ||||||| Sbjct 229919 CAACCATCAGAATCTGGGCACCATCAAGAGCAGCAACCTCTGCACAGAAATCGTTGAATA 229978 Query 364260 CACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 |||| | || || ||||| ||||| || || || || || || || ||| Sbjct 229979 CACCAGCCATGATGAAGTAGCCGTTTGTAATCTGGCTTCCATTGCACTCAACATGTATGT 230038 Query 364320 AA---AAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACT 364374 | || | ||||||||| || | || |||||| ||| | | || | | Sbjct 230039 CACCTCTGAGCGGACTTTTGACTTTAAGAAACTAGCTGACGTCACCAAAGTTAT-CGTCA 230097 Query 364375 TGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCT 364434 | || | ||||| | ||||| | || | ||||| | || || |||||| || Sbjct 230098 AG-AACTTGAACAAGATCATCGAGATCAACTTCTATCCTGTACCGGAGGCCGAGAAGTCA 230156 Query 364435 AATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACG 364483 || | |||||| | ||||||||| | || || ||||| | ||||||| Sbjct 230157 AACAAGCGTCACAGGCCGATTGGTATCGGCGTTCAGGGTTTGGCTGACG 230205 >seq5694 Length=14491 Score = 134 bits (148), Expect = 4e-26 Identities = 498/770 (65%), Gaps = 19/770 (2%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| |||||| | || || | | |||||| ||||| | |||||| |||| Sbjct 828 TTCACACACGCCTCACCTACCCTCTTCAATGCAGGAACCAACAGGCCACAGCTGTCCAGC 769 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || ||| ||||| ||||| ||| || || || | |||||| || ||| | Sbjct 768 TGCTTCCTGCTAGCCATGAAAGACGACAGCATTGAAGGCATTTATGACACTCTGAAGCAG 709 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC- 363725 || || || || ||||| || || ||||| || ||| | || | | || | | Sbjct 708 TGCGCCCTCATCTCCAAATCAGCTGGAGGAATCGGCGTAGCAGTCAGCTGTATTAGATCG 649 Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785 |||| || |||||| ||||||| || |||| || || || || |||||||| | Sbjct 648 ACAGGG-AGCTACATTGCCGGCACAAATGGCAACTCAAACGGTCTTGTCCCCATGCTGAG 590 Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845 |||| |||| || ||| | || ||||||||||||||| || | || || || Sbjct 589 AGTGTACAACAACACGGCGCGTTATGTCGACCAGGGTGGAAACAAAAGGCCCGGAGCCTT 530 Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA 363905 || ||||| || ||||| || ||| | ||||| || | ||||| ||| || Sbjct 529 CGCCATGTACCTTGAGCCCTGGCACTTTGATGTGTTTGACTTCTTGGAGCTGAAGAAGAA 470 Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965 ||| ||||| ||||| | | || | || || ||||| || | ||| | | |||| Sbjct 469 CACAGGAAAGGAGGAGCAGAGAGCCAGAGACCTCTTCTACGCCATGTGGATCCCCGACCT 410 Query 363966 TTTTATGAAGCGCGTGGAG-GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTC 364024 || ||||| | || ||| ||| || | ||||| || | || || | || || | Sbjct 409 GTTCATGAAAAGAGTAGAGAGCA-ACCAGGACTGGTCTCTGATGTGTCCTAATGAGTGCC 351 Query 364025 CAGGTCTTTCCGATGTATG--GGGTGACGACTAT--GTTGCTCTATACGAAAAGTATGAA 364080 | || || |||| || ||| || || | | | ||| || || | ||||| Sbjct 350 CTGGGCT---GGATGAGTGCTGGGGGAGGAGTTTGAGAAGCTTTACACCTCA--TATGAG 296 Query 364081 TCGGAGGGAAAGG---CTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137 |||||| | || ||| | | || ||| || | ||| || ||||| Sbjct 295 AAGGAGGGGAGGGTGAAGCGTGTG---GTGAAAGCTCAGCAGGTGTGGCACGCAATCATC 239 Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197 || || |||| || ||||| || || || ||| | || ||||| | |||||| | ||| Sbjct 238 GAGTCCCAGACAGAAACAGGTACTCCATACATGCTTTATAAAGACGCCTGCAACAGAAAG 179 Query 364198 TCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAA 364257 ||||||| ||| | || || || || || |||||||| || || || || ||||| Sbjct 178 ACCAACCATCAGAATCTGGGCACCATCAAGAGCAGCAACCTCTGCACAGAAATCGTTGAA 119 Query 364258 TACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCT 364307 |||||| | || || ||||| ||||| || || || || || || Sbjct 118 TACACCAGCCATGATGAAGTAGCCGTTTGTAATCTGGCTTCCATTGCACT 69 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303128728330412