Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq4673 120 3e-22 seq349 111 1e-19 seq80 109 5e-19 >seq4673 Length=16361 Score = 120 bits (132), Expect = 3e-22 Identities = 166/231 (72%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | || ||| ||||| || || | ||| |||||||| || |||||||| ||| Sbjct 2009 CCTCCCCTCAGACGGAGCAC-AAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 2067 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || ||||||||||| || |||| | ||||||||| || || ||| Sbjct 2068 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCGGGGGGG 2127 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||||||||| || ||| || ||||| | ||| | || ||| ||| ||| | Sbjct 2128 ATTCCTTCTTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCCACC 2187 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | ||| | ||| || || || || || || || || ||||||||| || Sbjct 2188 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTAACAAAGATCTGCATGCCT 2238 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | || ||| ||||| | || | ||| |||||||| || |||||||| ||| Sbjct 2464 CCTCCCCTCAGACGGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 2523 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || ||||||||||| || |||| | ||||||||| || || ||| Sbjct 2524 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCGGGGGGG 2583 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || ||| || ||||| | || | || || | | ||| | Sbjct 2584 ATCCCTTCCTTATCCTGGATCTTGGCCTTGACATTTTCAATTGTGTCACTTGGCTCCACC 2643 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || |||||||| || || || || |||||||| Sbjct 2644 TCCAAAGTGATGGTCTTCCCGGTTAGGGTCTTCACAAAGATCTGCAT 2690 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | || ||| || || | ||| | || || || || || |||||||| ||| Sbjct 2235 GCCTCCCCTCAGACGAAGAACCAGATGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGA 2294 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| || || ||||||||||| ||| |||| | ||||||||| || || || Sbjct 2295 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCGGGGGG 2354 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || ||||| || ||| || ||| | | ||| | || ||| ||| ||| | Sbjct 2355 GATACCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCAC 2414 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || || || || || || |||||||| Sbjct 2415 CTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTAACAAAGATCTGCAT 2462 >seq349 Length=568042 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | || |||||| || | ||| | ||| |||||||| || |||||||| ||| Sbjct 323411 CCTCCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 323352 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||| || ||||||||||| || |||| | | |||||| || || || Sbjct 323351 AGGGTGCGGCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGA 323292 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | ||| | || ||| | | ||| | Sbjct 323291 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACATTCTCAATGGTGTCGCTTGGCTCCACC 323232 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | ||| | ||||| || || || || || ||||| ||||||||| || Sbjct 323231 TCCAGGGTGATTGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCATGCCT 323181 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | || |||||| || | || | ||| |||||||| || |||||||| ||| Sbjct 326746 GCCTCCCCTCAGACGCAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 326687 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| || || ||||||||||| || |||| | | ||||||||| || || Sbjct 326686 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGG 326627 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| || ||||| | || | || ||| | | ||| | Sbjct 326626 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTTGGCTCCAC 326567 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | ||| || || || || || || || || ||||||||| Sbjct 326566 CTCTAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATG 326518 >seq80 Length=1733396 Score = 109 bits (120), Expect = 5e-19 Identities = 102/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 145668 TGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGAT 145727 |||| | || ||||| | ||||| |||||| | |||||||| |||||||| ||||| | Sbjct 121977 TGTACTCGACAATCTCTGTGCACAGGTTGCTAGACTTGATGGTGCCCAGATTCTGCTGGT 122036 Query 145728 TACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCG 145787 | || ||||||||||| |||||||||||||||||||| ||| ||||| || ||| | Sbjct 122037 TGCTCTTCCTGTTGCATGCGTCCTTGTAGAGCATGTATGGTGTACCAGTTTCTGTCTGAG 122096 Query 145788 TCTCCACGAT 145797 ||| | ||| Sbjct 122097 ACTCAATGAT 122106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471933348445440