Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq349 132 4e-26 seq4673 131 1e-25 >seq349 Length=568042 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||| || ||||| || || | || || || || |||| ||||| ||||| | Sbjct 321813 AAAAATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGCC 321872 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | || ||| | || || |||| |||||| || ||||||||||| || || || || Sbjct 321873 AAGTGACACCATTGAGAATGTCAAGGCAAAAATCCAGGACAAGGAGGGCATCCCCCCAGA 321932 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 || || | || || ||||||||||||||| | || ||| ||||||| ||||||| || Sbjct 321933 CCAGCAGAGGCTGATCTTTGCCGGCAAACAGCTGGAAGATGGCCGCACCCTCTCCGACTA 321992 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||| || || || |||||| | || | ||| |||| || | ||||| Sbjct 321993 CAACATCCAGAAGGAGTCCACCCTCCACCTTGTTCTGCGTCTGAGGGGAGG 322043 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||| || ||||| || || | || || || || |||| || || ||||| | Sbjct 326515 AAACATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACCCTAGAGGTGGAGCC 326574 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | ||| ||| | || || |||| || || || ||||||||||| ||||| || || Sbjct 326575 AAGCGACACCATTGAAAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGA 326634 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 || || | || || ||||||||||| ||| | || ||| ||||||| ||||||| || Sbjct 326635 CCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTA 326694 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||| || || || |||||| | || | ||| |||| || | ||||| Sbjct 326695 CAACATCCAGAAGGAGTCCACCCTCCACCTTGTTCTGCGTCTGAGGGGAGG 326745 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| | || ||||| | | Sbjct 322045 ATGCAGATCTTTGTGAAGACCCTCACTGGAAAGACCATCACCTTGGAGGTGGAGCCAAGT 322104 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || || |||||||| || ||||| || ||||| Sbjct 322105 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 322164 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||||||||||||| | || ||| ||||||| ||||||| |||||| Sbjct 322165 CAGAGGCTGATCTTTGCCGGCAAACAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 322224 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || |||||||||||| | || | || |||| || | ||||| Sbjct 322225 ATCCAGAAAGAATCCACCCTCCACCTTGTCCTGCGTCTGAGGGGAGG 322271 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || ||||| |||| || || ||||| | | | Sbjct 322501 ATGCAGATCTTTGTGAAGACCCTCACTGGCAAAACAATCACCCTGGAGGTGGAGCCAAGC 322560 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || || ||||||||||| ||||| || ||||| Sbjct 322561 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 322620 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || || ||| | || ||| ||||||| ||||||| |||||| Sbjct 322621 CAGAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 322680 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || |||||| | || | || |||| || | ||||| Sbjct 322681 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGAGG 322727 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || ||||| |||| || || ||||| | | | Sbjct 322957 ATGCAGATCTTTGTGAAGACCCTCACTGGCAAAACAATCACCCTGGAGGTGGAGCCAAGC 323016 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || || ||||||||||| ||||| || ||||| Sbjct 323017 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 323076 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || || ||| | || ||| ||||||| ||||||| |||||| Sbjct 323077 CAGAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 323136 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || |||||| | || | || |||| || | ||||| Sbjct 323137 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGAGG 323183 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || ||||| || |||| || |||||||| | | Sbjct 326747 ATGCAGATCTTCGTCAAGACCCTCACTGGTAAGACCATCACCCTGGAAGTGGAGCCAAGT 326806 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || || || ||||||||||| ||||| || ||||| Sbjct 326807 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 326866 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || || ||| | || ||| ||||||| ||||||| |||||| Sbjct 326867 CAGAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 326926 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || |||||||||||| | || | || |||| || | ||||| Sbjct 326927 ATCCAGAAAGAATCCACCCTCCACCTTGTCCTGCGTCTGAGGGGAGG 326973 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || ||||| |||| || || ||||| | | | Sbjct 326975 ATGCAGATCTTTGTGAAGACCCTCACAGGCAAAACAATCACCCTAGAGGTGGAGCCAAGC 327034 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || || ||||||||||| ||||| || ||||| Sbjct 327035 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 327094 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || || ||| | || || ||||||| ||||||| |||||| Sbjct 327095 CAGAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGACGGCCGCACCCTCTCCGACTACAAC 327154 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || |||||| | || | || |||| || | |||||| Sbjct 327155 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGAGGT 327202 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | |||||||| || |||| || || ||||| | | | Sbjct 322273 ATGCAGATCTTCGTCAAGACCCTTACCGGTAAGACCATCACCCTAGAGGTGGAGCCAAGC 322332 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || || ||||||||||| ||||| || ||||| Sbjct 322333 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 322392 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || || ||| | || || ||||||| ||||||| |||||| Sbjct 322393 CAGAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGACGGCCGCACCCTCTCCGACTACAAC 322452 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || |||||| | || | || |||| || | ||||| Sbjct 322453 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGAGG 322499 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || ||||| |||| || || ||||| | | | Sbjct 322729 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAAACAATCACCCTGGAGGTGGAGCCAAGC 322788 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || || ||||||||||| ||||| || ||||| Sbjct 322789 GACACCATTGAAAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 322848 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || || ||| | || ||| ||||||| ||||||| |||||| Sbjct 322849 CAGAGGCTGATTTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 322908 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || |||||| | || | || |||| || | ||||| Sbjct 322909 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGAGG 322955 >seq4673 Length=16361 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || |||||||| || | || || || || |||| || || ||||| ||| | Sbjct 2462 ATGCAGATCTTTGTTAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 2403 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || || || || || |||||||| || |||||||| Sbjct 2402 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGATAAAGAGGGTATCCCCCCCGATCAG 2343 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | || ||| ||||||| ||||||| |||||| Sbjct 2342 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 2283 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || ||||||||||| | ||| | ||| | || || | ||||| Sbjct 2282 ATCCAGAAAGAATCCACTCTCCATCTGGTTCTTCGTCTGAGGGGAGG 2236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419659115552290