Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Labrus_20bergylta_20[refseq_20GCF_5F900080235.1_202016-05-03] 13,466 sequences; 805,480,521 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq4673 154 3e-32 seq349 127 5e-24 >seq4673 Length=16361 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 ||| || ||||| | ||| |||||| ||||| || ||||||| ||| ||||| || || Sbjct 2250 AAGAACCAGATGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 2309 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATC 288380 ||| | || || || ||||||||||||||||| ||| ||||| || |||||||| Sbjct 2310 TTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCGGGGGGGATACCCTCTTTATC 2369 Query 288381 CTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGT 288440 |||||| || || |||||||| || || | ||||| | || || || || ||||| || Sbjct 2370 CTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGT 2429 Query 288441 CTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || ||||| ||||| || || |||||||| Sbjct 2430 CTTGCCAGTCAGGGTCTTAACAAAGATCTGCAT 2462 Score = 141 bits (156), Expect = 2e-28 Identities = 146/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| ||||| || ||||| | || || || || ||| Sbjct 2044 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAG 2103 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| ||| ||||||||||||||||||||||| || || || ||||| Sbjct 2104 ATCAGACGCTGCTGATCGGGGGGGATTCCTTCTTTATCCTGGATCTTGGCCTTGACGTTC 2163 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||||| | || || || || ||||| ||||| || ||||| ||||| || Sbjct 2164 TCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTAACA 2223 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 2224 AAGATCTGCAT 2234 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| ||||| || ||||| | || || || || ||| Sbjct 2500 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAG 2559 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| ||| ||||| ||||| ||||||||||| || || || || ||| Sbjct 2560 ATCAGACGCTGCTGATCGGGGGGGATCCCTTCCTTATCCTGGATCTTGGCCTTGACATTT 2619 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || | ||||| ||||||||||| || ||||| || Sbjct 2620 TCAATTGTGTCACTTGGCTCCACCTCCAAAGTGATGGTCTTCCCGGTTAGGGTCTTCACA 2679 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 2680 AAGATCTGCAT 2690 >seq349 Length=568042 Score = 127 bits (140), Expect = 5e-24 Identities = 146/195 (75%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| ||||| || ||||||| ||| ||||| || ||||| | || || || || || Sbjct 326938 TTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAA 326879 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||||| | ||| ||| |||||| || || || || |||||||| || || || || Sbjct 326878 GATCAGCCTCTGCTGA---TCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC 326822 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||| || || | || || | || ||||| || ||||| ||||| || || || ||||| Sbjct 326821 GTTCTCAATGGTGTCACTTGGCTCCACTTCCAGGGTGATGGTCTTACCAGTGAGGGTCTT 326762 Query 288459 GACGAATATCTGCAT 288473 |||||| |||||||| Sbjct 326761 GACGAAGATCTGCAT 326747 Score = 125 bits (138), Expect = 2e-23 Identities = 145/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| ||||| |||||||| | || || || || ||| Sbjct 322463 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCCAGCTGCTTACCAGCAAAG 322404 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| ||| |||||| || || || || |||||||| || || || || Sbjct 322403 ATCAGCCTCTGCTGA---TCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACA 322347 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||||| | || || || || ||||| ||||| ||||| || |||||| Sbjct 322346 TTCTCAATGGTGTCGCTTGGCTCCACCTCTAGGGTGATGGTCTTACCGGTAAGGGTCTTG 322287 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 322286 ACGAAGATCTGCAT 322273 Score = 123 bits (136), Expect = 6e-23 Identities = 157/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||| | ||| || || ||||| || ||||||| ||| ||||| |||||| Sbjct 323396 AGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCT 323337 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTA 288378 || | || || || || |||||||| | ||| ||| |||||| || ||||| || Sbjct 323336 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGA---TCTGGGGGAATGCCTTCCTTG 323280 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATC 288438 |||||||| || || || || || || || | ||||| | || || || || ||||| Sbjct 323279 TCCTGGATCTTAGCCTTGACATTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATT 323220 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||||||||| |||||||| Sbjct 323219 GTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 323185 Score = 113 bits (124), Expect = 1e-19 Identities = 148/204 (73%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| ||||| || ||||| | ||||| || || ||| Sbjct 322007 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAG 321948 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || |||||| || || || || ||||||||||| || || || Sbjct 321947 ATCAGCCTCTGCTGG---TCTGGGGGGATGCCCTCCTTGTCCTGGATTTTTGCCTTGACA 321891 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || || | || || || || ||||| ||||| || || || ||||| Sbjct 321890 TTCTCAATGGTGTCACTTGGCTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTC 321831 Query 288460 ACGAATATCTGCATTATGTTATTC 288483 || || ||||||||| | || ||| Sbjct 321830 ACAAAGATCTGCATTTTTTTCTTC 321807 Score = 113 bits (124), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| ||||| || ||||| | || || || || || Sbjct 322919 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAA 322860 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| ||| |||||| || || || || |||||||| || || || || Sbjct 322859 ATCAGCCTCTGCTGA---TCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACA 322803 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 ||||| || | ||||| | || || || || ||||| || || || || || |||||| Sbjct 322802 TTTTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATTGTTTTGCCAGTGAGGGTCTTG 322743 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 322742 ACGAAGATCTGCAT 322729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179450870539948